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RBG_16_DPX1_47_11_RBG_16_scaffold_1958

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181..1086)
DNA (906bp) protein (302aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Metallo-beta-lactamase domain protein id=2550797 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
zinc-dependent hydrolase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1099..2670)
DNA (1572bp) protein (524aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Apolipoprotein N-acyltransferase n=2 Tax=Geobacter metallireducens RepID=LNT_GEOMG
lnt; apolipoprotein N-acyltransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2741..3418
DNA (678bp) protein (226aa)
Strongly similar to two-component response regulator OmpR/PhoB family n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2T5_9BACT
two component signal transduction response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RBG_16_Deltaproteobacteria_47_11_curated
winged-helix transcriptional response regulator
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3396..4499
DNA (1104bp) protein (368aa)
heavy metal sensor signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Hypothetical histidine kinase protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2U3_9BACT
sensor histidine kinase, HAMP domain-containing
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4398..4745)
DNA (348bp) protein (116aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..6670
DNA (1692bp) protein (564aa)
glycosyl transferase family protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative uncharacterized protein id=4795955 bin=GWC2_Syntrophobacterales_56_13 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6761..8539
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2L4_9BACT
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8753..10237
DNA (1485bp) protein (495aa)
Glycosyl transferase family protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N315_9PSED
glycosyl transferase family protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
glycosyl transferase family protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10600..12201
DNA (1602bp) protein (534aa)
arnT; protein ArnT (EC:2.-.-.-) Tax=RBG_16_Deltaproteobacteria_47_11_curated
arnT; protein ArnT (EC:2.-.-.-)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2L4_9BACT
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12280..13257
DNA (978bp) protein (326aa)
oxidoreductase-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
oxidoreductase-like protein id=14625274 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
oxidoreductase-like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13279..14385
DNA (1107bp) protein (369aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
DegT/DnrJ/EryC1/StrS aminotransferase id=2881677 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DegT/DnrJ/EryC1/StrS aminotransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14434..15141
DNA (708bp) protein (236aa)
glycosyl transferase group 2 family protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
family 2 glycosyl transferase id=14625275 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
glycosyl transferase group 2 family protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15675..16625
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI000373E6C9
dehydrogenase Tax=RBG_16_Deltaproteobacteria_47_11_curated
oxidoreductase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16613..17830
DNA (1218bp) protein (406aa)
Radical SAM domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZA8_9GAMM
radical SAM protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Fe-S oxidoreductase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17897..19060
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000371CE6C
group 1 glycosyl transferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
group 1 glycosyl transferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19169..19849
DNA (681bp) protein (227aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19913..20791
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4P3_9BACT
Lipopolysaccharide kinase (Kdo/WaaP) family Tax=RBG_16_Deltaproteobacteria_47_11_curated
Lipopolysaccharide kinase (Kdo/WaaP) family
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21137..21862
DNA (726bp) protein (242aa)
family 2 glycosyl transferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
family 2 glycosyl transferase id=14625275 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
family 2 glycosyl transferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21886..22443
DNA (558bp) protein (186aa)
protein-S-isoprenylcysteine methyltransferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative uncharacterized protein id=3513080 bin=GWC2_Nitrospirae_57_13 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
protein-S-isoprenylcysteine methyltransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22638..23246
DNA (609bp) protein (203aa)
Serine/threonine protein kinase n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KHC7_9GAMM
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
serine/threonine protein kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23384..23737)
DNA (354bp) protein (118aa)
hypothetical protein; K07042 probable rRNA maturation factor Tax=RBG_16_Deltaproteobacteria_47_11_curated
Probable rRNA maturation factor id=3343204 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1958_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23724..25043)
DNA (1320bp) protein (440aa)
metal dependent phosphohydrolase; K07037 Tax=RBG_16_Deltaproteobacteria_47_11_curated
Membrane-associated metal-dependent phosphohydrolase id=4540911 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
metal dependent phosphohydrolase
Displaying 22 items

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