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RBG_16_DPX1_47_11_RBG_16_scaffold_543

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Displaying items 1-30 of 145 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_543_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..128
DNA (126bp) protein (42aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295..675)
DNA (381bp) protein (127aa)
Response regulator receiver protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIN4_9BACT id=5223118 bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
response regulator receiver protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
response regulator receiver protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1044..1442
DNA (399bp) protein (133aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1532..2470)
DNA (939bp) protein (313aa)
Chaperone protein dnaJ n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSH8_SYNAS
molecular chaperone DnaJ Tax=RBG_16_Deltaproteobacteria_47_11_curated
molecular chaperone DnaJ
RBG_16_DPX1_47_11_RBG_16_scaffold_543_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2575..3561
DNA (987bp) protein (329aa)
Putative serine protease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALU6_AZOBR
putative serine protease Tax=RBG_16_Deltaproteobacteria_47_11_curated
serine protease
RBG_16_DPX1_47_11_RBG_16_scaffold_543_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3778..4104
DNA (327bp) protein (109aa)
B-ketoadipate enol-lactone hydrolase; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative 3-oxoadipate enol-lactonase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3R8_9DELT
3-oxoadipate enol-lactonase
RBG_16_DPX1_47_11_RBG_16_scaffold_543_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4077..4685
DNA (609bp) protein (203aa)
Putative 3-oxoadipate enol-lactonase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3R8_9DELT
Alpha/beta hydrolase fold Tax=RBG_16_Deltaproteobacteria_47_11_curated
Alpha/beta hydrolase fold
RBG_16_DPX1_47_11_RBG_16_scaffold_543_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5194..6387
DNA (1194bp) protein (398aa)
serB; phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Phosphoserine phosphatase SerB n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVE4_DESAC
phosphoserine phosphatase
RBG_16_DPX1_47_11_RBG_16_scaffold_543_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6484..7053
DNA (570bp) protein (190aa)
Multimeric flavodoxin WrbA n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBH7_DESTA
multimeric flavodoxin WrbA Tax=RBG_16_Deltaproteobacteria_47_11_curated
multimeric flavodoxin WrbA
RBG_16_DPX1_47_11_RBG_16_scaffold_543_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7226..9052
DNA (1827bp) protein (609aa)
Radical SAM domain protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V9C0_9LEPT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9105..9257
DNA (153bp) protein (51aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9356..9604
DNA (249bp) protein (83aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9766..10968
DNA (1203bp) protein (401aa)
narK; protein NarK Tax=RBG_16_Deltaproteobacteria_47_11_curated
NarK id=4425008 bin=GWF2_Syntrophobacterales_56_9 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
narK; protein NarK
RBG_16_DPX1_47_11_RBG_16_scaffold_543_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11053..11427)
DNA (375bp) protein (125aa)
Class I peptide chain release factor n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKQ0_GEOS8
class I peptide chain release factor Tax=RBG_16_Deltaproteobacteria_47_11_curated
class I peptide chain release factor
RBG_16_DPX1_47_11_RBG_16_scaffold_543_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11449..12138)
DNA (690bp) protein (230aa)
PhoU family transcriptional regulator n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7708D
phosphate uptake regulator PhoU; K02039 phosphate transport system protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
phosphate uptake regulator PhoU
RBG_16_DPX1_47_11_RBG_16_scaffold_543_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12621..13115
DNA (495bp) protein (165aa)
ACT domain-containing protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C6U5_DESTA
ACT domain-containing protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
ACT domain-containing protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13297..13614)
DNA (318bp) protein (106aa)
two component transcriptional regulator, winged helix family; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RBG_16_Deltaproteobacteria_47_11_curated
Two component transcriptional regulator, winged helix family id=3660720 bin=GWC2_Deltaproteobacteria_42_51 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
two component transcriptional regulator, winged helix family
RBG_16_DPX1_47_11_RBG_16_scaffold_543_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13601..14950)
DNA (1350bp) protein (450aa)
FAD linked oxidase-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
FAD linked oxidase-like protein id=14425736 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
FAD linked oxidase-like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14958..16340)
DNA (1383bp) protein (461aa)
glycolate oxidase subunit glcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RBG_16_Deltaproteobacteria_47_11_curated
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] id=14425124 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
glycolate oxidase subunit glcD
RBG_16_DPX1_47_11_RBG_16_scaffold_543_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16571..17293
DNA (723bp) protein (241aa)
Helix-turn-helix transcriptional regulator, GntR family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A1L8_PELCD
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RBG_16_Deltaproteobacteria_47_11_curated
GntR family transcriptional regulator
RBG_16_DPX1_47_11_RBG_16_scaffold_543_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17531..18700
DNA (1170bp) protein (390aa)
Iron-containing alcohol dehydrogenase n=2 Tax=Chloroflexus RepID=A9WJG6_CHLAA
iron-containing alcohol dehydrogenase Tax=RBG_16_Deltaproteobacteria_47_11_curated
iron-containing alcohol dehydrogenase
RBG_16_DPX1_47_11_RBG_16_scaffold_543_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18785..20239
DNA (1455bp) protein (485aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SUS7_9DELT
methylmalonate-semialdehyde dehydrogenase Tax=RBG_16_Deltaproteobacteria_47_11_curated
methylmalonate-semialdehyde dehydrogenase
RBG_16_DPX1_47_11_RBG_16_scaffold_543_23
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20302..20757
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SUS6_9DELT
Uncharacterized protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_24
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21008..21223
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BTZ7_ANAMD
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21678..22430
DNA (753bp) protein (251aa)
TPR repeat-containing protein n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K3M3_CYAP8
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_26
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22627..22986
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R995_AMMDK
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_543_27
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23041..23142
DNA (102bp) protein (34aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_28
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23813..24232
DNA (420bp) protein (140aa)
Thioesterase-like protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFL1_9FIRM
Thioesterase-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_543_29
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24270..26594
DNA (2325bp) protein (775aa)
molybdopterin oxidoreductase; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Molybdopterin oxidoreductase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSA4_9BACT
molybdopterin oxidoreductase
RBG_16_DPX1_47_11_RBG_16_scaffold_543_30
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26609..27295
DNA (687bp) protein (229aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Molybdopterin oxidoreductase iron-sulfur binding subunit n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SP32_9BACT
4Fe-4S ferredoxin iron-sulfur binding domain protein
Displaying items 1-30 of 145 in total

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