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RBG_16_DPX1_47_11_RBG_16_scaffold_18889

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..217)
DNA (216bp) protein (72aa)
TRAP transporter DctM subunit n=1 Tax=Octadecabacter arcticus 238 RepID=M9RT94_9RHOB
dctM3; TRAP transporter DctM subunit Tax=RBG_16_Deltaproteobacteria_47_11_curated
dctM3; TRAP transporter DctM subunit
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247..921)
DNA (675bp) protein (225aa)
Transcriptional regulator, GntR family n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RA44_AMMDK
GntR family transcriptional regulator Tax=RBG_16_Deltaproteobacteria_47_11_curated
GntR family transcriptional regulator
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3344)
DNA (396bp) protein (132aa)
NUDIX hydrolase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RTH3_9CLOT
NUDIX hydrolase Tax=RBG_16_Deltaproteobacteria_47_11_curated
NUDIX hydrolase
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..4377)
DNA (1032bp) protein (344aa)
diguanylate cyclase Tax=RBG_16_Deltaproteobacteria_47_11_curated
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domain-containing protein id=1708238 bin=GWB2_Proteobacteria_55_19 species=Herbaspirillum sp. GW103 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
diguanylate cyclase
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4755..5435)
DNA (681bp) protein (227aa)
Ribonucleoside-triphosphate reductase-like protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Q3_9EURY
ribonucleoside-triphosphate reductase-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
ribonucleoside-triphosphate reductase-like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5448..5708)
DNA (261bp) protein (87aa)
Marine sediment metagenome DNA, contig: S01H1_S01783 Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6096..8237)
DNA (2142bp) protein (714aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2) Tax=RBG_16_Deltaproteobacteria_47_11_curated
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase class III catalytic subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C355_DESTA
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8562..10388)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EFL6_GEOBB
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10695..10973
DNA (279bp) protein (93aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12190..12912)
DNA (723bp) protein (241aa)
phosphoribosyltransferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amidophosphoribosyltransferase family protein id=3904917 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphoribosyltransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12981..14345)
DNA (1365bp) protein (455aa)
Tetratricopeptide TPR_2 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWG8_DESAC
TPR domain-containing protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14349..14795)
DNA (447bp) protein (149aa)
transcriptional regulator, trar/dksa family; K06204 DnaK suppressor protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
DnaK suppressor protein DksA id=4324481 bin=GWC2_Pelobacter_58_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14788..15153)
DNA (366bp) protein (122aa)
iojap family protein; K09710 ribosome-associated protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Iojap protein family id=3904914 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
iojap family protein
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16178..17446)
DNA (1269bp) protein (423aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RBG_16_Deltaproteobacteria_47_11_curated
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase id=4082372 bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17443..18579)
DNA (1137bp) protein (379aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Glutamate 5-kinase id=1913849 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
proB; gamma-glutamyl kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18572..19591)
DNA (1020bp) protein (340aa)
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
obgE; GTPase ObgE; K03979 GTP-binding protein id=14424954 bin=bin1_lowGC species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
GTP-binding protein Obg/CgtA
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19671..19931)
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RL27_PELCD
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RBG_16_Deltaproteobacteria_47_11_curated
rpmA; 50S ribosomal protein L27
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20022..20336)
DNA (315bp) protein (105aa)
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_16_Deltaproteobacteria_47_11_curated
50S ribosomal protein L21 id=4920880 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L21
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20429..21187)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM40_9DELT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21570..22811)
DNA (1242bp) protein (414aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] Tax=RBG_16_Deltaproteobacteria_47_11_curated
RNAse G n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKW4_PELPD
ribonuclease
RBG_16_DPX1_47_11_RBG_16_scaffold_18889_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23131..23736)
DNA (606bp) protein (202aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
hypothetical protein id=15193566 bin=GWC2_NOV_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
Displaying 21 items

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