ggKbase home page

RBG_16_DPX1_47_11_RBG_16_scaffold_1802

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1224
DNA (1224bp) protein (408aa)
Uncharacterized protein MJ1066 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y1066_METJA
spore coat polysaccharide biosynthesis protein SpsC Tax=RBG_16_Deltaproteobacteria_47_11_curated
spore coat polysaccharide biosynthesis protein SpsC
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..1878
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1X8_9BACT
sugar transferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
sugar transferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2064..3194
DNA (1131bp) protein (377aa)
Glycosyl transferase, family I n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N969_DESTT
glycosyl transferase, family I Tax=RBG_16_Deltaproteobacteria_47_11_curated
glycosyl transferase, family I
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3594..5549
DNA (1956bp) protein (652aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K187_DESAC
polysaccharide biosynthesis protein CapD Tax=RBG_16_Deltaproteobacteria_47_11_curated
polysaccharide biosynthesis protein CapD
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6520..6906
DNA (387bp) protein (129aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7352..8092
DNA (741bp) protein (247aa)
surE; 5'/3'-nucleotidase SurE (EC:3.1.3.5 3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Deltaproteobacteria_47_11_curated
surE; 5'/3'-nucleotidase SurE (EC:3.1.3.5 3.1.3.6)
5'-nucleotidase SurE id=2009494 bin=GWB2_Proteobacteria_55_19 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8156..9520
DNA (1365bp) protein (455aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MIAB_SYNAS
tRNA 2-methylthioadenosine synthase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RBG_16_Deltaproteobacteria_47_11_curated
tRNA 2-methylthioadenosine synthase
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9562..10551
DNA (990bp) protein (330aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RBG_16_Deltaproteobacteria_47_11_curated
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=F16PA_SYNAS
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10684..11976
DNA (1293bp) protein (431aa)
Fructose-bisphosphate aldolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6N8_GEOUR
fructose/tagatose bisphosphate aldolase-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
fructose/tagatose bisphosphate aldolase-like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12082..12462
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000361FB28
glutaredoxin Tax=RBG_16_Deltaproteobacteria_47_11_curated
glutaredoxin
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12593..13219)
DNA (627bp) protein (209aa)
Phosphate transport regulator related to PhoU n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4CBB0_9DELT id=1244495 bin=RBG9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
phosphate transport regulator related to PhoU Tax=RBG_16_Deltaproteobacteria_47_11_curated
phosphate transport regulator related to PhoU
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13289..14326)
DNA (1038bp) protein (346aa)
id=3729046 Tax=RBG_16_Deltaproteobacteria_47_11_curated
id=3729046 bin=GWC2_Syntrophus__56_31 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14984..15796
DNA (813bp) protein (271aa)
L-alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RBG_16_Deltaproteobacteria_47_11_curated
L-alanine dehydrogenase (EC:1.4.1.1)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000372CBBE
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15875..16081
DNA (207bp) protein (69aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Alanine dehydrogenase n=1 Tax=Bacillus coagulans (strain 2-6) RepID=F7Z0L5_BACC6
alanine dehydrogenase
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16118..16810
DNA (693bp) protein (231aa)
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Cytidylate kinase n=2 Tax=Geobacter sulfurreducens RepID=KCY_GEOSL
cmk; cytidylate kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16812..17192
DNA (381bp) protein (127aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17193..18992
DNA (1800bp) protein (600aa)
30S ribosomal protein S1 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3D4_PELCD
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RBG_16_Deltaproteobacteria_47_11_curated
rpsA; 30S ribosomal protein S1
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19135..19845)
DNA (711bp) protein (237aa)
iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative iron dependent repressor id=4994521 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
iron dependent repressor
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19842..20039)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=B4UDV9_ANASK
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20041..22041)
DNA (2001bp) protein (667aa)
small GTP-binding protein domain-containing protein; K04759 ferrous iron transport protein B Tax=RBG_16_Deltaproteobacteria_47_11_curated
Small GTP-binding protein id=4330864 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
small GTP-binding protein domain-containing protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1802_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22045..22530)
DNA (486bp) protein (162aa)
Ferric uptake regulation protein Fur n=2 Tax=Geobacter metallireducens RepID=Q39SV4_GEOMG
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RBG_16_Deltaproteobacteria_47_11_curated
Fur family transcriptional regulator
Displaying 21 items

View Taxonomy