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RBG_16_DPX1_47_11_RBG_16_scaffold_1105

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..356
DNA (354bp) protein (118aa)
MATE efflux family protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
MATE efflux family protein id=2883625 bin=GWF2_OP3_43_52 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
MATE efflux family protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

533..901
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AFG6_GEOSK
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1044..1181
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHC2_9FIRM
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1184..1615
DNA (432bp) protein (144aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative uncharacterized protein id=4045979 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1733..1936
DNA (204bp) protein (68aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative uncharacterized protein id=2283902 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2055..2390
DNA (336bp) protein (112aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2380..3312)
DNA (933bp) protein (311aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Ppx/GppA phosphatase n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S680_PROA2
Ppx/GppA phosphatase
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3398..3592)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000371B302
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3689..4270)
DNA (582bp) protein (194aa)
phosphoheptose isomerase (EC:5.-.-.-); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Deltaproteobacteria_47_11_curated
phosphoheptose isomerase (EC:5.-.-.-)
Phosphoheptose isomerase id=4317465 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..5244)
DNA (954bp) protein (318aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Lipid A biosynthesis acyltransferase id=2008338 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipid A biosynthesis acyltransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5248..5667
DNA (420bp) protein (140aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5696..7726
DNA (2031bp) protein (677aa)
Sulfatase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B970_TURPD
sulfatase Tax=RBG_16_Deltaproteobacteria_47_11_curated
sulfatase
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7840..8316
DNA (477bp) protein (159aa)
FeS cluster assembly scaffold IscU n=1 Tax=Desulfurispora thermophila RepID=UPI000360A81F
FeS cluster assembly scaffold protein NifU Tax=RBG_16_Deltaproteobacteria_47_11_curated
FeS cluster assembly scaffold protein NifU
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9022..10068
DNA (1047bp) protein (349aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4P8_9DELT
TRAP-type C4-dicarboxylate transport system, periplasmic component Tax=RBG_16_Deltaproteobacteria_47_11_curated
TRAP-type C4-dicarboxylate transport system, periplasmic component
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10343..10858
DNA (516bp) protein (172aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4P9_9DELT
tripartite ATP-independent periplasmic transporter DctQ Tax=RBG_16_Deltaproteobacteria_47_11_curated
tripartite ATP-independent periplasmic transporter DctQ
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10846..12138
DNA (1293bp) protein (431aa)
TRAP transporter, DctM subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4Q0_9DELT
TRAP dicarboxylate transporter subunit DctM Tax=RBG_16_Deltaproteobacteria_47_11_curated
TRAP dicarboxylate transporter subunit DctM
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12348..12542)
DNA (195bp) protein (65aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12542..13729)
DNA (1188bp) protein (396aa)
radical SAM domain-containing protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Radical SAM domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJS6_SYNFM
radical SAM domain-containing protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14358..14978
DNA (621bp) protein (207aa)
hypothetical protein; K04070 putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Radical SAM domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6ST49_9DELT
radical SAM protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15215..15502
DNA (288bp) protein (96aa)
RNP-1 like RNA-binding protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCN2_DESAR
RNP-1 like RNA-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
RNP-1 like RNA-binding protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15583..15861
DNA (279bp) protein (93aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16239..16820
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DQ82_9RHOB id=133502 bin=ACD81 species=Oceanibulbus indolifex genus=Oceanibulbus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Phage-related replication protein-like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_23
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16827..17894
DNA (1068bp) protein (356aa)
Magnesium and cobalt transporter protein n=1 Tax=planctomycete KSU-1 RepID=I3IJA4_9PLAN
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=RBG_16_Deltaproteobacteria_47_11_curated
magnesium and cobalt transport protein CorA
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_24
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17952..18197
DNA (246bp) protein (82aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18376..18648
DNA (273bp) protein (91aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_trna_1
unknown

Not on your lists

18806..18879
DNA (74bp)
transferRNA
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_26
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18918..19352
DNA (435bp) protein (145aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_27
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19349..19990
DNA (642bp) protein (214aa)
alpha/beta hydrolase; K07018 Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein; K07018 id=14626733 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_28
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20032..20925)
DNA (894bp) protein (298aa)
kdkA; 3-deoxy-D-manno-octulosonic acid (KDO) kinase; K11211 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Similar to KDO kinase ( 2-keto-3-deoxy-D-manno-octulosonic acid ) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7B1_9BACT
kdkA; 3-deoxy-D-manno-octulosonic acid (KDO) kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1105_29
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21067..21708
DNA (642bp) protein (214aa)
glu-trnagln amidotransferase suBunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=GATB_THEYD
Glu-tRNAGln amidotransferase subunit B
Displaying items 1-30 of 52 in total

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