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RBG_16_DPX1_47_11_RBG_16_scaffold_1587

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..604
DNA (603bp) protein (201aa)
gabT; 4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_16_Deltaproteobacteria_47_11_curated
4-aminobutyrate aminotransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZZ4_CALAS
gabT; 4-aminobutyrate aminotransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

768..1964
DNA (1197bp) protein (399aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Acetylornithine deacetylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYG3_9CLOT
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2401..4116
DNA (1716bp) protein (572aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E6L1_GEOLS
thiamine pyrophosphate protein TPP binding domain-containing protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
thiamine pyrophosphate protein TPP binding domain-containing protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4109..5653
DNA (1545bp) protein (515aa)
Oligopeptide ABC transporter substrate-binding protein n=1 Tax=uncultured organism RepID=M1PVJ1_9ZZZZ
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
family 5 extracellular solute-binding protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5666..6550
DNA (885bp) protein (295aa)
Auxin efflux carrier protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Conserved hypothetical membrane protein, auxin efflux carrier family id=1777662 bin=GWB2_Proteobacteria_55_19 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
permease
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6555..9017
DNA (2463bp) protein (821aa)
multi-sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RBG_16_Deltaproteobacteria_47_11_curated
sensor histidine kinase n=1 Tax=Bacillus acidiproducens RepID=UPI00037B7746
multi-sensor signal transduction histidine kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9132..9497
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036FB203
response regulator receiver protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
response regulator receiver protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9516..11765
DNA (2250bp) protein (750aa)
multi-sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative Hybrid sensor histidine kinase id=2971022 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12902..13108
DNA (207bp) protein (69aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
UniRef90_D6TBL0 2-hydroxy-3-oxopropionate reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBL0_9CHLR id=1245701 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
UniRef90_D6TBL0 2-hydroxy-3-oxopropionate reductase Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13399..13542
DNA (144bp) protein (48aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13593..14429
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5U6_CALAS
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14799..15101)
DNA (303bp) protein (101aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15467..16453
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU13_KORVE
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16450..16644
DNA (195bp) protein (65aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16599..16817)
DNA (219bp) protein (73aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16814..17116)
DNA (303bp) protein (101aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17428..17679
DNA (252bp) protein (84aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17776..17886
DNA (111bp) protein (37aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18076..18393
DNA (318bp) protein (106aa)
glgB1; protein Glprotein GB1 (EC:2.4.1.18) Tax=RBG_16_Deltaproteobacteria_47_11_curated
glgB1; protein Glprotein GB1 (EC:2.4.1.18)
Putative uncharacterized protein id=4672561 bin=GWC2_Nitrospirae-rel_56_14 species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18530..18832
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000374C0B3
RNP-1 like RNA-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
RNP-1 like RNA-binding protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18862..19200
DNA (339bp) protein (113aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19282..19473
DNA (192bp) protein (64aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_23
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20396..21166
DNA (771bp) protein (257aa)
membrane protease subunit, stomatin/prohibitin Tax=RBG_16_Deltaproteobacteria_47_11_curated
membrane protease subunit, stomatin/prohibitin id=14424421 bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
membrane protease subunit, stomatin/prohibitin
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_24
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21294..22451
DNA (1158bp) protein (386aa)
multi-sensor signal transduction histidine kinase Tax=RBG_16_Deltaproteobacteria_47_11_curated
PAS/PAC sensor signal transduction histidine kinase id=3330852 bin=GWF2_Geobacter_54_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
multi-sensor signal transduction histidine kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22634..23071)
DNA (438bp) protein (146aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_26
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23266..24357
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUQ2_9GAMM
type 11 methyltransferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
type 11 methyltransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_27
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25147..25716)
DNA (570bp) protein (190aa)
Putative GAF sensor protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJE0_SYNFM
putative GAF sensor protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
putative GAF sensor protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_28
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25771..26064)
DNA (294bp) protein (98aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_29
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26100..27332)
DNA (1233bp) protein (411aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein id=14622916 bin=bin5_DeltaP species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX1_47_11_RBG_16_scaffold_1587_30
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27345..28136)
DNA (792bp) protein (264aa)
Membrane protease subunits, stomatin/prohibitin homologs n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RCN6_THETN
HflC; membrane protease subunit stomatin/prohibitin-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
HflC; membrane protease subunit stomatin/prohibitin-like protein
Displaying items 1-30 of 38 in total

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