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RBG_16_DPX1_47_11_RBG_16_scaffold_748

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_748_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..338)
DNA (336bp) protein (112aa)
Uncharacterized conserved protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Uncharacterized conserved protein id=4691654 bin=GWC2_Syntrophus__56_31 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX1_47_11_RBG_16_scaffold_748_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(922..2073)
DNA (1152bp) protein (384aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Adenylate/guanylate cyclase family protein,protein kinase family protein id=2516501 bin=GWA2_Elusimicrobia_56_46 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
serine/threonine protein kinase
RBG_16_DPX1_47_11_RBG_16_scaffold_748_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2423..3775)
DNA (1353bp) protein (451aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amidophosphoribosyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WI62_GEOS8
amidophosphoribosyltransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_748_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3932..4918)
DNA (987bp) protein (329aa)
UDP-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_16_Deltaproteobacteria_47_11_curated
UDP-glucose 4-epimerase n=5 Tax=Clostridium thermocellum RepID=A3DBU8_CLOTH
UDP-glucose 4-epimerase
RBG_16_DPX1_47_11_RBG_16_scaffold_748_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4974..6302)
DNA (1329bp) protein (443aa)
putative ribonuclease BN; K07058 membrane protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative ribonuclease BN id=2929071 bin=GWF2_OP3_38_59 species=Psychromonas ingrahamii genus=Psychromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
putative ribonuclease BN
RBG_16_DPX1_47_11_RBG_16_scaffold_748_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6491..6946)
DNA (456bp) protein (152aa)
Large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel Tax=RBG_16_Deltaproteobacteria_47_11_curated
Large-conductance mechanosensitive channel id=4412358 bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Large-conductance mechanosensitive channel
RBG_16_DPX1_47_11_RBG_16_scaffold_748_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7264..8247
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3G5_9BACT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
cas6_1; CRISPR-associated protein Cas6
RBG_16_DPX1_47_11_RBG_16_scaffold_748_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8348..9514
DNA (1167bp) protein (389aa)
CRISPR-associated protein n=1 Tax=planctomycete KSU-1 RepID=I3INX7_9PLAN
CRISPR-associated protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
CRISPR-associated protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9603..12050
DNA (2448bp) protein (816aa)
CRISPR-associated protein, Csm1 family n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B7U0_DESCC
Csm1 family CRISPR-associated protein; K07016 Tax=RBG_16_Deltaproteobacteria_47_11_curated
Csm1 family CRISPR-associated protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12034..12603
DNA (570bp) protein (190aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_748_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12624..13298
DNA (675bp) protein (225aa)
CRISPR-associated RAMP protein, Csm3 family n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B7U2_DESCC
Csm3 family CRISPR-associated RAMP protein; K09002 hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Csm3 family CRISPR-associated RAMP protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13310..14260
DNA (951bp) protein (317aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative uncharacterized protein id=4160850 bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfotomaculum carboxydivorans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14264..15514
DNA (1251bp) protein (417aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
CRISPR-associated protein id=3401001 bin=GWF2_Lentisphaerae_38_69 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15511..17190
DNA (1680bp) protein (560aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9J1_THEID
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17233..18330
DNA (1098bp) protein (366aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2ND01_DESAR
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 Tax=RBG_16_Deltaproteobacteria_47_11_curated
CRISPR-associated protein Cas1
RBG_16_DPX1_47_11_RBG_16_scaffold_748_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18334..18609
DNA (276bp) protein (92aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2ND02_DESAR
CRISPR-associated protein Cas2 Tax=RBG_16_Deltaproteobacteria_47_11_curated
CRISPR-associated protein Cas2
RBG_16_DPX1_47_11_RBG_16_scaffold_748_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18633..18956
DNA (324bp) protein (108aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9J0_THEID
CRISPR-associated protein Cas2 Tax=RBG_16_Deltaproteobacteria_47_11_curated
CRISPR-associated protein Cas2
RBG_16_DPX1_47_11_RBG_16_scaffold_748_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18934..19074
DNA (141bp) protein (47aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_748_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19062..19220
DNA (159bp) protein (53aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_748_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19544..19741
DNA (198bp) protein (66aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_748_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20179..20607)
DNA (429bp) protein (143aa)
PilT protein domain protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative PilT protein domain-containing protein id=1800763 bin=GWD2_Deltaproteobacteria_55_8 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PilT protein domain protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20604..20864)
DNA (261bp) protein (87aa)
Ribbon-helix-helix protein, copG family
id=1800765 Tax=RBG_16_Deltaproteobacteria_47_11_curated
id=1800765 bin=GWD2_Deltaproteobacteria_55_8 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RBG_16_DPX1_47_11_RBG_16_scaffold_748_23
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21223..21456)
DNA (234bp) protein (78aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Uncharacterized protein id=4879839 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_748_24
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21656..23125)
DNA (1470bp) protein (490aa)
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RBG_16_Deltaproteobacteria_47_11_curated
tRNA nucleotidyltransferase, CC-adding n=1 Tax=Caloramator australicus RC3 RepID=G0V4C0_9CLOT
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase
RBG_16_DPX1_47_11_RBG_16_scaffold_748_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23413..24459
DNA (1047bp) protein (349aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1] Tax=RBG_16_Deltaproteobacteria_47_11_curated
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B75D6E
deoxyguanosinetriphosphate triphosphohydrolase
RBG_16_DPX1_47_11_RBG_16_scaffold_748_26
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24456..25841
DNA (1386bp) protein (462aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
GTPase-like protein id=2101178 bin=GWB2_Nitrospirae_rel_47_37 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
GTPase
RBG_16_DPX1_47_11_RBG_16_scaffold_748_27
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26017..27651
DNA (1635bp) protein (545aa)
Response regulator n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A252_PELCD
response regulator Tax=RBG_16_Deltaproteobacteria_47_11_curated
response regulator
RBG_16_DPX1_47_11_RBG_16_scaffold_748_28
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


29558..29767
DNA (210bp) protein (70aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Valine--tRNA ligase n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG08_HYDTT
valS; valyl-tRNA synthetase
Displaying 28 items

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