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RBG_16_DPX2_64_85_RBG_16_scaffold_4092

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(681..1889)
DNA (1209bp) protein (403aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Tyrosine--tRNA ligase id=4740388 bin=GWC2_Proteo_65_14_Ab886 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
tyrS; tyrosyl-tRNA ligase
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1865..2707)
DNA (843bp) protein (281aa)
hypothetical protein; K09769 hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4740389 bin=GWC2_Proteo_65_14_Ab886 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..4502)
DNA (1572bp) protein (524aa)
phosphodiesterase; K06950 uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
phosphodiesterase; K06950 uncharacterized protein id=14624752 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
phosphodiesterase
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4526..5134)
DNA (609bp) protein (203aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RBG_16_Deltaproteobacteria_64_85_curated
5-formyltetrahydrofolate cyclo-ligase id=4740391 bin=GWC2_Proteo_65_14_Ab886 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
5-formyltetrahydrofolate cyclo-ligase
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5529..5819)
DNA (291bp) protein (97aa)
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4740392 bin=GWC2_Proteo_65_14_Ab886 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5853..6077)
DNA (225bp) protein (75aa)
id=4740393 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4740393 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6225..7841)
DNA (1617bp) protein (539aa)
na+/Pi-cotransporter family protein; K03324 phosphate:Na+ symporter Tax=RBG_16_Deltaproteobacteria_64_85_curated
na+/Pi-cotransporter family protein; K03324 phosphate:Na+ symporter id=14624756 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
na+/Pi-cotransporter family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7855..8778)
DNA (924bp) protein (308aa)
signal recognition particle-docking protein FtsY Tax=RBG_16_Deltaproteobacteria_64_85_curated
Signal recognition particle receptor FtsY id=2306442 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
signal recognition particle-docking protein FtsY
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8775..12365)
DNA (3591bp) protein (1197aa)
condensin subunit Smc; K03529 chromosome segregation protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
condensin subunit Smc; K03529 chromosome segregation protein id=14624758 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
chromosome segregation ATPase SMC
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12523..15288)
DNA (2766bp) protein (922aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] id=14624759 bin=bin5_DeltaP species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin5_DeltaP organism_group=Deltaproteobacteria
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15311..17392)
DNA (2082bp) protein (694aa)
glyS; glycyl-tRNA synthetase subunit beta; K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Tax=RBG_16_Deltaproteobacteria_64_85_curated
glyS; glycyl-tRNA synthetase subunit beta; K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] id=14624760 bin=bin5_DeltaP species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
glyS; glycyl-tRNA synthetase subunit beta
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17418..18296)
DNA (879bp) protein (293aa)
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] Tax=RBG_16_Deltaproteobacteria_64_85_curated
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit id=2306446 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18392..19045)
DNA (654bp) protein (218aa)
DNA replication and repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RBG_16_Deltaproteobacteria_64_85_curated
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=14624762 bin=bin5_DeltaP species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
DNA replication and repair protein RecO
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19226..20044)
DNA (819bp) protein (273aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624763 bin=bin5_DeltaP species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20054..20815)
DNA (762bp) protein (254aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
TPR repeat domain protein id=4740442 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20812..21669)
DNA (858bp) protein (286aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Deltaproteobacteria_64_85_curated
methylthioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=14624765 bin=bin5_DeltaP species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
S-methyl-5'-thioadenosine phosphorylase
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21808..22860)
DNA (1053bp) protein (351aa)
rlmN; 23S rRNA (2-methyl-A2503)-methyltransferase; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Dual-specificity RNA methyltransferase RlmN id=4740444 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rlmN; 23S rRNA (2-methyl-A2503)-methyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22952..23389)
DNA (438bp) protein (146aa)
ndk; hypothetical protein (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Deltaproteobacteria_64_85_curated
ndk; hypothetical protein (EC:2.7.4.6)
Nucleoside diphosphate kinase id=3943008 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23389..23937)
DNA (549bp) protein (183aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit id=3943006 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
pyruvate ferredoxin/flavodoxin oxidoreductase
RBG_16_DPX2_64_85_RBG_16_scaffold_4092_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23942..24694)
DNA (753bp) protein (251aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
2-oxoglutarate ferredoxin oxidoreductase, beta subunit id=3943005 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Displaying 20 items

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