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RBG_16_DPX2_64_85_RBG_16_scaffold_4256

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..649)
DNA (444bp) protein (148aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14623812 bin=bin5_DeltaP species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1008..1523
DNA (516bp) protein (172aa)
two component, sigma54 specific, Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=3551999 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
sigma-54-dependent transcriptional response regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1540..1794
DNA (255bp) protein (85aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1802..2146)
DNA (345bp) protein (115aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=2276316 bin=GWA2_Deltaproteo_65_63 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2187..2690)
DNA (504bp) protein (168aa)
blue (type 1) copper domain-containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative blue (Type 1) copper domain protein id=1772227 bin=GWB2_Deltaproteobacteria_65_81 species=Aquabacterium sp. PL1F5 genus=Aquabacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2687..4009)
DNA (1323bp) protein (441aa)
multicopper oxidase type 3 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Multicopper oxidase type 3 id=4937045 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
multicopper oxidase type 3
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4033..5469)
DNA (1437bp) protein (479aa)
copper resistance-related lipoprotein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Outer membrane efflux protein id=2276265 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
copper resistance-related lipoprotein
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6405..6623
DNA (219bp) protein (73aa)
id=14624048 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624048 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6689..7138
DNA (450bp) protein (150aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14623807 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..7432
DNA (222bp) protein (74aa)
id=4814880 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4814880 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7625..8269
DNA (645bp) protein (215aa)
metal dependent phosphohydrolase Tax=RBG_16_Deltaproteobacteria_64_85_curated
metal dependent phosphohydrolase id=14623811 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
metal dependent phosphohydrolase
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8637..8891
DNA (255bp) protein (85aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=1772212 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9032..10939)
DNA (1908bp) protein (636aa)
Divalent metal cation transporter MntH n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MR56_9BACT
natural resistance-associated macrophage protein metal ion transporter NRAMP Tax=RBG_16_Deltaproteobacteria_64_85_curated
iron transporter
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10952..12106)
DNA (1155bp) protein (385aa)
histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] id=14623790 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
sensor histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12099..13472)
DNA (1374bp) protein (458aa)
sigma-54-dependent transcriptional response regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=3551999 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
sigma-54-dependent transcriptional response regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13550..15262)
DNA (1713bp) protein (571aa)
ferredoxin--nitrite reductase (EC:1.7.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] Tax=RBG_16_Deltaproteobacteria_64_85_curated
ferredoxin--nitrite reductase (EC:1.7.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] id=14623786 bin=bin5_DeltaP species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin5_DeltaP organism_group=Deltaproteobacteria
ferredoxin--nitrite reductase (EC:1.7.7.1)
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15259..16827)
DNA (1569bp) protein (523aa)
elongation factor Tu GTP binding domain-containing protein; K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
cysN; sulfate adenylyltransferase, subunit 1; K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] id=14623785 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cysN; sulfate adenylyltransferase, subunit 1
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16827..17627)
DNA (801bp) protein (267aa)
cysD; sulfate adenylyltransferase; K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Sulfate adenylyltransferase, subunit 2 id=3552004 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
cysD; sulfate adenylyltransferase subunit 2
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17630..17914)
DNA (285bp) protein (95aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14623782 bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18755..20188
DNA (1434bp) protein (478aa)
ResB-like protein; K07399 cytochrome c biogenesis protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
ResB-like protein; K07399 cytochrome c biogenesis protein id=14623760 bin=bin5_DeltaP species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cytochrome C biogenesis protein ResB
RBG_16_DPX2_64_85_RBG_16_scaffold_4256_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20185..20817
DNA (633bp) protein (211aa)
cytochrome c assembly protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Cytochrome c assembly protein id=2473183 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
cytochrome C biogenesis protein ResC
Displaying 22 items

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