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RBG_16_DPX2_64_85_RBG_16_scaffold_6461

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..2294
DNA (2292bp) protein (764aa)
id=4736578 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4736578 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2301..3497
DNA (1197bp) protein (399aa)
WD40 domain-containing protein; K03641 TolB protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
WD40 domain protein beta Propeller id=4736577 bin=GWC2_Nitrospirae_57_13 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
WD40 domain-containing protein
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3494..4999
DNA (1506bp) protein (502aa)
id=4911569 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4911569 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5032..6630
DNA (1599bp) protein (533aa)
peptide ABC transporter periplasmic peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Peptide ABC transporter, periplasmic peptide-binding lipoprotein id=4911570 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
peptide ABC transporter substrate-binding lipoprotein
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6620..7498
DNA (879bp) protein (293aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Tax=RBG_16_Deltaproteobacteria_64_85_curated
Oligopeptide ABC transporter permease id=4911572 bin=GWC2_Nitrospirae-rel_56_14 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7495..8391
DNA (897bp) protein (299aa)
dipeptide/oligopeptide/nickel ABC transporter permease Tax=RBG_16_Deltaproteobacteria_64_85_curated
Binding-protein-dependent transport systems inner membrane component id=4736573 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
binding-protein-dependent transport system inner membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8388..9491
DNA (1104bp) protein (368aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Peptide/nickel transport system ATP-binding protein id=4911576 bin=GWC2_Nitrospirae-rel_56_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
oligopeptide/dipeptide ABC transporter ATPase
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9502..10515
DNA (1014bp) protein (338aa)
oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=1884071 bin=GWD2_Nitrospirae-related_57_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
oligopeptide ABC transporter ATP-binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10666..11184
DNA (519bp) protein (173aa)
chrG; type II secretion system pseudopilin ChrG; K02456 general secretion pathway protein G Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4390864 bin=GWF2_Geobacter_54_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
chrG; type II secretion system pseudopilin ChrG
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..13359
DNA (2163bp) protein (721aa)
Metal dependent phosphohydrolase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M322_GEODF
metal dependent phosphohydrolase Tax=RBG_16_Deltaproteobacteria_64_85_curated
metal dependent phosphohydrolase
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13372..14502)
DNA (1131bp) protein (377aa)
ackA; acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Acetate kinase id=2480885 bin=GWC2_Proteo_65_14_Ab886 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ackA; acetate kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_6461_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14499..16727)
DNA (2229bp) protein (743aa)
xfp; phosphoketolase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Phosphoketolase id=2480880 bin=GWC2_Proteo_65_14_Ab886 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
xfp; phosphoketolase
Displaying 12 items

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