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RBG_16_DPX2_64_85_RBG_16_scaffold_1255

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..544)
DNA (543bp) protein (181aa)
NHL repeat containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
NHL repeat containing protein id=4033858 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(549..1868)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Outer membrane efflux protein id=4033857 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RND transporter
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2062..3474)
DNA (1413bp) protein (471aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Glutamine synthetase id=1925225 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
glutamine synthetase
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3515..3853)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Nitrogen regulatory protein P-II id=3171832 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
nitrogen regulatory protein P-II 1
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4069..4788
DNA (720bp) protein (240aa)
Cytoplasmic protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRD6_9BACT
cytoplasmic protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
cytoplasmic protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4789..5541
DNA (753bp) protein (251aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRD5_9BACT
hypothetical protein; K06872 uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5590..6153
DNA (564bp) protein (188aa)
Protein LemA n=1 Tax=Clostridium ultunense Esp RepID=M1ZB59_9CLOT
LemA family protein; K03744 LemA protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
LemA family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6209..6721
DNA (513bp) protein (171aa)
cytoplasmic protein; K06962 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=4033854 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
cytoplasmic protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6758..7384)
DNA (627bp) protein (209aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Glycerol-3-phosphate acyltransferase id=4033853 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7596..8954)
DNA (1359bp) protein (453aa)
mleA; malate oxidoreductase, NAD-dependent; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Malate oxidoreductase, NAD-dependent id=1925125 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
mleA; malate oxidoreductase, NAD-dependent
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9012..9215
DNA (204bp) protein (68aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9208..10362
DNA (1155bp) protein (385aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=14624738 bin=bin5_DeltaP species=Methanothermobacter thermautotrophicus genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
myo-inositol-1-phosphate synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10289..11464)
DNA (1176bp) protein (392aa)
putative glycosyltransferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RBG_16_Deltaproteobacteria_64_85_curated
putative glycosyltransferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] id=14624737 bin=bin5_DeltaP species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative glycosyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11461..12456)
DNA (996bp) protein (332aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624736 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12466..13086)
DNA (621bp) protein (207aa)
id=14624735 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624735 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13244..14446
DNA (1203bp) protein (401aa)
aspartate aminotransferase; K11358 aspartate aminotransferase [EC:2.6.1.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Amino acid aminotransferase, putative id=4033846 bin=GWC2_Proteo_65_14_Ab886 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
aspartate aminotransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14443..15537
DNA (1095bp) protein (365aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Histidinol-phosphate aminotransferase id=4033845 bin=GWC2_Proteo_65_14_Ab886 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
histidinol-phosphate aminotransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15485..16429)
DNA (945bp) protein (315aa)
id=14624732 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624732 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16558..16926)
DNA (369bp) protein (123aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624731 bin=bin5_DeltaP species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16930..17094)
DNA (165bp) protein (55aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17253..18644
DNA (1392bp) protein (464aa)
two component sigma54 specific Fis family transcriptional regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Fis family two component sigma-54 specific transcriptional regulator id=14624729 bin=bin5_DeltaP species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
response regulator of hydrogenase 3 activity (sensor HydH)
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18811..19572
DNA (762bp) protein (254aa)
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RBG_16_Deltaproteobacteria_64_85_curated
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily id=4033840 bin=GWC2_Proteo_65_14_Ab886 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19594..20691)
DNA (1098bp) protein (366aa)
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K09760 DNA recombination protein RmuC id=14624727 bin=bin5_DeltaP species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=bin5_DeltaP organism_group=Deltaproteobacteria
rmuC; DNA recombination protein RmuC
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20733..21002
DNA (270bp) protein (90aa)
id=4033838 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4033838 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21069..21179
DNA (111bp) protein (37aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_26
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21176..21949)
DNA (774bp) protein (258aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
2-oxoglutarate ferredoxin oxidoreductase beta subunit id=4033836 bin=GWC2_Proteo_65_14_Ab886 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
2-oxoglutarate ferredoxin oxidoreductase subunit beta
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_27
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21967..23724)
DNA (1758bp) protein (586aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=14624724 bin=bin5_DeltaP species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_28
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23828..25285)
DNA (1458bp) protein (486aa)
outer membrane efflux protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Outer membrane efflux protein id=14624723 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
outer membrane efflux protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_29
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25282..28404)
DNA (3123bp) protein (1041aa)
RND family efflux pump inner membrane protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Deltaproteobacteria_64_85_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14624722 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RND family efflux pump inner membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1255_30
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28405..29568)
DNA (1164bp) protein (388aa)
secretion protein HlyD Tax=RBG_16_Deltaproteobacteria_64_85_curated
efflux pump, RND family, membrane fusion lipoprotein id=14624721 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RND family efflux pump membrane fusion lipoprotein
Displaying items 1-30 of 43 in total

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