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RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3..422
DNA (420bp) protein (140aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_2
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1263..1466
DNA (204bp) protein (68aa)
lipopolysaccharide heptosyltransferase I; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RBG_16_Gammaproteobacteria_62_13__curated
Lipopolysaccharide heptosyltransferase I n=1 Tax=Kingella kingae ATCC 23330 RepID=F5S9G9_9NEIS
lipopolysaccharide heptosyltransferase I
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_3
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2257..2736
DNA (480bp) protein (160aa)
3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RBG_16_Gammaproteobacteria_
Phosphomethylpyrimidine synthase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCC2_9GAMM
3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_4
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2879..3289)
DNA (411bp) protein (137aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein id=12496673 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_5
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3291..3665)
DNA (375bp) protein (125aa)
pspE2; rhodanese-related sulfurtransferase (EC:2.8.1.-); K01013 [EC:2.8.1.-] Tax=RBG_16_Gammaproteobacteria_62_13__curated
rhodanese-like protein id=12496205 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sulfurtransferase
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_6
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3665..4327)
DNA (663bp) protein (221aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADT8_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase Tax=RBG_16_Gammaproteobacteria_62_13__curated
protein-L-isoaspartate(D-aspartate) O-methyltransferase
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_7
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4598..6535
DNA (1938bp) protein (646aa)
Phosphomethylpyrimidine synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GL66_THISH
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RBG_16_Gammaproteobacteria_62_13__curated
thiamine biosynthesis protein ThiC
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_8
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6557..7066
DNA (510bp) protein (170aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
Putative uncharacterized protein id=4885135 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_9
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7273..7686
DNA (414bp) protein (138aa)
aldehyde-activating protein n=1 Tax=Methylococcus capsulatus RepID=UPI00030C9945
glutathione-dependent formaldehyde-activating GFA Tax=RBG_16_Gammaproteobacteria_62_13__curated
glutathione-dependent formaldehyde-activating GFA
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7846..8532)
DNA (687bp) protein (229aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
Conserved uncharacterized protein id=4466180 bin=GWF2_Nitrospirae_44_13 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_11
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8665..10560
DNA (1896bp) protein (632aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=RBG_16_Gammaproteobacteria_62_13__curated
ATP-dependent DNA helicase RecQ n=1 Tax=Spongiibacter tropicus RepID=UPI0003B7573F
ATP-dependent DNA helicase RecQ
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_12
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10740..10904
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AN76_PELPD
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_13
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11014..11826)
DNA (813bp) protein (271aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=RBG_16_Gammaproteobacteria_62_13__curated
Pseudouridine synthase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD70_GEOUR
pseudouridine synthase
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_14
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12036..12389)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPB2_SOLCM
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_15
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12496..12636
DNA (141bp) protein (47aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_16
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12698..14548
DNA (1851bp) protein (617aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_17
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14656..15624)
DNA (969bp) protein (323aa)
Rhomboid family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGP5_ANASK
rhomboid family protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
rhomboid family protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_11933_18
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15594..16457)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWA8_9BACT
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
Displaying 18 items

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