ggKbase home page

RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..535
DNA (534bp) protein (178aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RBG_16_Gammaproteobacteria_62_13__curated
Ribonucleoside-diphosphate reductase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIW3_NITSI
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_2
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1143
DNA (549bp) protein (183aa)
bcp; peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RBG_16_Gammaproteobacteria_62_13__curated
bcp; peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDM2_9BACT
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_3
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1162..2553
DNA (1392bp) protein (464aa)
PhoH family protein n=1 Tax=Thauera sp. 27 RepID=N6YTF2_9RHOO
putative PhoH-related protein; K07175 PhoH-like ATPase Tax=RBG_16_Gammaproteobacteria_62_13__curated
putative PhoH-related protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_4
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2534..3790
DNA (1257bp) protein (419aa)
mltC; membrane-bound lytic murein transglycosylase C (EC:3.2.1.-); K08306 membrane-bound lytic murein transglycosylase C [EC:3.2.1.-] Tax=RBG_16_Gammaproteobacteria_62_13__curated
mltC; membrane-bound lytic murein transglycosylase C (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase C n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4R2_9BACT
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_5
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3976..4320)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQP6_9ZZZZ
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_6
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4427..5383)
DNA (957bp) protein (319aa)
LysR family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000366F886
LysR family transcriptional regulator Tax=RBG_16_Gammaproteobacteria_62_13__curated
LysR family transcriptional regulator
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_7
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..6614)
DNA (1137bp) protein (379aa)
Twitching motility protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3C3_DESAC
twitching motility protein; K02669 twitching motility protein PilT Tax=RBG_16_Gammaproteobacteria_62_13__curated
twitching motility protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_8
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6735..6962)
DNA (228bp) protein (76aa)
thiosulfate sulfurtransferase (EC:2.8.1.1) Tax=RBG_16_Gammaproteobacteria_62_13__curated
thiosulfate sulfurtransferase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035F1476
conserved hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_9
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7033..7602)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK63_THIDA
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7716..8882)
DNA (1167bp) protein (389aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSK2_SIDLE
membrane protein involved in aromatic hydrocarbon degradation; K06076 long-chain fatty acid transport protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
aromatic hydrocarbon degradation membrane protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_11
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9344..9832)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GZW4_9GAMM
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_12
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9906..10130)
DNA (225bp) protein (75aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=RBG_16_Gammaproteobacteria_62_13__curated
SirA family protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BXD0_9GAMM
SirA family protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_13
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10256..10624)
DNA (369bp) protein (123aa)
Rhodanese domain protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUH8_THISH
rhodanese domain-containing protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
rhodanese domain-containing protein
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_14
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11166..12524
DNA (1359bp) protein (453aa)
Peptidase M48, Ste24p n=2 Tax=Nitrosococcus oceani RepID=Q3J7X4_NITOC
peptidase M48, Ste24p Tax=RBG_16_Gammaproteobacteria_62_13__curated
peptidase M48, Ste24p
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_15
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12745..13158
DNA (414bp) protein (138aa)
Sulfur oxidation protein SoxX n=1 Tax=uncultured organism RepID=E3T352_9ZZZZ
monoheme cytochrome SoxX Tax=RBG_16_Gammaproteobacteria_62_13__curated
monoheme cytochrome SoxX
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_16
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13203..13676
DNA (474bp) protein (158aa)
Sulfur oxidation protein SoxY-like protein n=1 Tax=uncultured organism RepID=E3T353_9ZZZZ
sulfur oxidation protein SoxY-like Tax=RBG_16_Gammaproteobacteria_62_13__curated
sulfur oxidation protein SoxY-like
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_17
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13705..14016
DNA (312bp) protein (104aa)
sulfur compound chelating protein SoxZ Tax=RBG_16_Gammaproteobacteria_62_13__curated
sulfur compound chelating protein SoxZ id=12497728 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
soxZ; sulfur compound chelating protein SoxZ
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_18
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14079..14948
DNA (870bp) protein (290aa)
Sulfur oxidation protein SoxA n=1 Tax=uncultured organism RepID=E3T355_9ZZZZ
cytochrome C/sulfur oxidation protein SoxA Tax=RBG_16_Gammaproteobacteria_62_13__curated
soxA; sulfur oxidation protein SoxA
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_19
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15290..15592)
DNA (303bp) protein (101aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_20
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15753..16838
DNA (1086bp) protein (362aa)
Trifunctional nucleotide phosphoesterase protein YfkN n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5ABX8_9PROT
sulfate thiol esterase SoxB Tax=RBG_16_Gammaproteobacteria_62_13__curated
sulfate thiol esterase SoxB
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_21
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16998..17882
DNA (885bp) protein (295aa)
phosphoribulokinase (EC:2.7.1.19); K00855 phosphoribulokinase [EC:2.7.1.19] Tax=RBG_16_Gammaproteobacteria_62_13__curated
phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQT4_THISH
RBG_16_Gammaproteobacteria_62_13__RBG_16_scaffold_12900_22
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17973..18848
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035EDD94
metal dependent phosphohydrolase Tax=RBG_16_Gammaproteobacteria_62_13__curated
metal dependent phosphohydrolase
Displaying 22 items

View Taxonomy