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RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_1
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..326)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F10 RepID=UPI0003098DDD
hypothetical protein Tax=RBG_16_Gamma2_64_10_curated
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_2
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

886..1047
DNA (162bp) protein (54aa)
Tax=RBG_16_Gamma2_64_10_curated
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_3
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1217..1435)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RPL5_ALLVD
hypothetical protein Tax=RBG_16_Gamma2_64_10_curated
hypothetical protein
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_4
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1471..1665
DNA (195bp) protein (65aa)
Tax=RBG_16_Gamma2_64_10_curated
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_5
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2935..3945)
DNA (1011bp) protein (337aa)
DNA-directed RNA polymerase subunit alpha n=3 Tax=Azotobacter vinelandii RepID=C1DKN8_AZOVD
rpoA; DNA-directed RNA polymerase subunit alpha Tax=RBG_16_Gamma2_64_10_curated
rpoA; DNA-directed RNA polymerase subunit alpha
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_6
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3976..4602)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=3 Tax=Cycloclasticus RepID=K0C842_CYCSP
Ribosomal protein S4 Tax=RBG_16_Gamma2_64_10_curated
Ribosomal protein S4
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_7
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4744..5163)
DNA (420bp) protein (140aa)
30S ribosomal protein S11 n=4 Tax=Xanthomonas RepID=D2UBJ4_XANAP
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Gamma2_64_10_curated
30S ribosomal protein S11
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5675..5788)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Sutterella RepID=E7H4U1_9BURK
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Gamma2_65_34_curated
rpmJ; 50S ribosomal protein L36
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_9
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5871..7217)
DNA (1347bp) protein (449aa)
Protein translocase subunit SecY n=2 Tax=Thioalkalivibrio RepID=B8GV38_THISH
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Gamma2_64_10_curated
secY; preprotein translocase subunit SecY
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_10
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7218..7673)
DNA (456bp) protein (152aa)
50S ribosomal protein L15 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5U0_9GAMM
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L15P
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_11
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7785..7991)
DNA (207bp) protein (69aa)
50S ribosomal protein L30 n=2 Tax=Thauera RepID=C4KC34_THASP
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Gamma2_64_10_curated
rpmD; 50S ribosomal protein L30
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_12
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8003..8560)
DNA (558bp) protein (186aa)
30S ribosomal protein S5 n=2 Tax=Nitrosococcus oceani RepID=RS5_NITOC
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Gamma2_64_10_curated
rpsE; 30S ribosomal protein S5
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_13
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8529..8885)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000369B9F7
Ribosomal protein L18 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L18
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_14
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8898..9431)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Pseudomonas thermotolerans RepID=UPI0003737D92
rplF; 50S ribosomal protein L6 Tax=RBG_16_Gamma2_64_10_curated
rplF; protein RplF
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_15
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9450..9842)
DNA (393bp) protein (131aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Gamma2_64_10_curated
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5080773 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
30S ribosomal protein S8
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_16
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9866..10171)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=RS14_METCA
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gamma2_64_10_curated
rpsN; 30S ribosomal protein S14
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_17
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10177..10716)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RL5_NITMU
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Gamma2_64_10_curated
rplE; 50S ribosomal protein L5
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_18
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10726..11046)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCP4_9GAMM
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Gamma2_64_10_curated
rplX; 50S ribosomal protein L24
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_19
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11167..11535)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Succinatimonas sp. CAG:777 RepID=R5EWY8_9GAMM
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L14
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_20
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11616..11894)
DNA (279bp) protein (93aa)
30S ribosomal protein S17 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z329_9GAMM
30S ribosomal protein S17 Tax=RBG_16_Gamma2_64_10_curated
30S ribosomal protein S17
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_21
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11898..12086)
DNA (189bp) protein (63aa)
50S ribosomal protein L29 n=2 Tax=Marinobacter RepID=A3JEP5_9ALTE
rpmC; 50S ribosomal protein L29 Tax=RBG_16_Gamma2_64_10_curated
rpmC; 50S ribosomal protein L29
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_22
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12119..12529)
DNA (411bp) protein (137aa)
50S ribosomal protein L16 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E0D1_9GAMM
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Gamma2_64_10_curated
rplP; 50S ribosomal protein L16
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_23
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12541..13221)
DNA (681bp) protein (227aa)
30S ribosomal protein S3 n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4STL2_META2
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gamma2_64_10_curated
rpsC; 30S ribosomal protein S3
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_24
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13221..13586)
DNA (366bp) protein (122aa)
50S ribosomal protein L22 n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYD7_9GAMM
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Gamma2_64_10_curated
rplV; large subunit ribosomal protein L22
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_25
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13592..13879)
DNA (288bp) protein (96aa)
30S ribosomal protein S19 n=1 Tax=Azoarcus toluclasticus RepID=UPI00035CEFE2
rpsS; 30S ribosomal protein S19 Tax=RBG_16_Gamma2_64_10_curated
rpsS; 30S ribosomal protein S19
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_26
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13883..14716)
DNA (834bp) protein (278aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L2 id=1308463 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rplB; 50S ribosomal protein L2
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_27
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14732..15073)
DNA (342bp) protein (114aa)
50S ribosomal protein L23 n=1 Tax=Leeia oryzae RepID=UPI00037BA4A8
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_16_Gamma2_64_10_curated
rplW; 50S ribosomal protein L23
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_28
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15070..15690)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Gilvimarinus chinensis RepID=UPI00037053ED
rplD; 50S ribosomal protein L4 Tax=RBG_16_Gamma2_64_10_curated
rplD; 50S ribosomal protein L4
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_29
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15703..16365)
DNA (663bp) protein (221aa)
50S ribosomal protein L3 n=1 Tax=Thiocapsa marina 5811 RepID=F9U5S9_9GAMM
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L3
RBG_16_Gammaproteobacteria_64_10_RBG_16_scaffold_10561_30
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16376..16687)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BCA6A
rpsJ, nusE; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Gamma2_64_10_curated
rpsJ; small subunit ribosomal protein S10
Displaying items 1-30 of 31 in total

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