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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6..488)
DNA (483bp) protein (161aa)
Protein Smg homolog n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3C1_NITHN
hypothetical protein; K03747 Smg protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(542..1654)
DNA (1113bp) protein (371aa)
DNA protecting protein DprA n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KCB7_NITWC
DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
DNA protecting protein DprA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1686..2903)
DNA (1218bp) protein (406aa)
peptidoglycan-binding protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B69B8C
peptidoglycan-binding LysM Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
peptidoglycan-binding LysM
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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2933..3469
DNA (537bp) protein (179aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CEE5_9GAMM
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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3560..4489
DNA (930bp) protein (310aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FE42_9GAMM
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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4486..5814
DNA (1329bp) protein (443aa)
16S rRNA methyltransferase B n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JRK6_PSEST
16S rRNA methyltransferase B Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
16S rRNA methyltransferase B
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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5792..6370
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9U2Z0_MARPU
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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6352..8640
DNA (2289bp) protein (763aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GU15_THISH
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PAS/PAC sensor signal transduction histidine kinase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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8637..10031
DNA (1395bp) protein (465aa)
Ribosomal RNA small subunit methyltransferase B n=2 Tax=sulfur-oxidizing symbionts RepID=G2DF84_9GAMM
Fis family two component sigma54 specific transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
nitrogen assimilation regulatory protein NtrX
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10164..11543
DNA (1380bp) protein (460aa)
TrkA-N domain protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5C5_ALKEH
trkA; potassium transporter peripheral membrane component; K03499 trk system potassium uptake protein TrkA Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
trkA; potassium transporter peripheral membrane component
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_11
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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11721..13175
DNA (1455bp) protein (485aa)
Trk system potassium uptake protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3K1_NITHN
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
potassium uptake protein, TrkH family
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_14097_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13177..13488
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037368C9
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
TPR repeat-containing protein
Displaying 12 items

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