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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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158..1849
DNA (1692bp) protein (564aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Smithella sp. ME-1 RepID=V4FHM3_9DELT
AMP-dependent synthetase and ligase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
AMP-dependent synthetase and ligase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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1846..3012
DNA (1167bp) protein (389aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW92_9PROT
AMP-dependent synthetase and ligase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
acyltransferase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3038..4393)
DNA (1356bp) protein (452aa)
rimO; 30S ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Methylovorus RepID=C6XEH1_METSD
rimO; 30S ribosomal protein S12 methylthiotransferase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4532..5074)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DG42_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5319..6539)
DNA (1221bp) protein (407aa)
polynucleotide adenylyltransferase region; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Multifunctional CCA protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUN3_NITHN
polynucleotide adenylyltransferase region
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6588..7670
DNA (1083bp) protein (361aa)
Putative zinc protease protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NN69_RALSL
zinc protease protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Putative zinc protease protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7835..8782)
DNA (948bp) protein (316aa)
epimerase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037E248D
NAD-dependent epimerase/dehydratase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
NAD-dependent epimerase/dehydratase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9008..9445)
DNA (438bp) protein (146aa)
lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003761256
lytic murein transglycosylase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_28391_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9385..10788)
DNA (1404bp) protein (468aa)
lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Lytic transglycosylase catalytic n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E6E0_9GAMM
lytic murein transglycosylase
Displaying 9 items

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