ggKbase home page

RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(416..742)
DNA (327bp) protein (109aa)
adhesin n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035F8307
dsrR; HesB/YadR/YfhF-family protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
HesB/YadR/YfhF-family protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..2325)
DNA (1542bp) protein (514aa)
cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Cobyrinic acid A,C-diamide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZD8_9GAMM
cobB; Cobyrinic acid A,C-diamide synthase CobB/DsrN
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2376..3584)
DNA (1209bp) protein (403aa)
polysulfide reductase NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Sulfur oxidation protein DsrP n=1 Tax=uncultured bacterium ws172H5 RepID=I1X4U1_9BACT
polysulfide reductase NrfD
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3636..4361)
DNA (726bp) protein (242aa)
Sulfur oxidation protein DsrO n=1 Tax=uncultured bacterium ws085G8 RepID=I1X5B3_9BACT
dsrO; 4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4358..4852)
DNA (495bp) protein (165aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein id=12494743 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4995..6995)
DNA (2001bp) protein (667aa)
Intracellular sulfur oxidation protein DsrL n=1 Tax=uncultured bacterium ws172H5 RepID=I1X4U4_9BACT
dsrL; DsrL protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
NADPH-dependent glutamate synthase subunit beta-like oxidoreductase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7120..8547)
DNA (1428bp) protein (476aa)
Sulfur oxidation protein DsrK n=1 Tax=uncultured bacterium ws034A6 RepID=I1X568_9BACT
reductase, iron-sulfur binding subunit Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hmeD_[H]; Sulfite reduction-associated complex DsrMKJOP protein DsrK (HmeD)
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8617..9363)
DNA (747bp) protein (249aa)
Sulfur oxidation protein DsrM n=1 Tax=uncultured bacterium ws138B4 RepID=I1X4L9_9BACT
dsrM; DsrM protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
dsrM; DsrM protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9475..9810)
DNA (336bp) protein (112aa)
DsrC-like protein n=1 Tax=uncultured bacterium ws034A6 RepID=I1X570_9BACT
tRNA 2-thiouridine synthesizing protein E; Dissimilatory sulfite reductase, gamma subunit Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DsrC family protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9855..10154)
DNA (300bp) protein (100aa)
Sulfur relay protein TusB/DsrH n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GT88_9GAMM
sulfur relay protein TusB/DsrH Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
sulfur relay protein TusB/DsrH
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_11
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10168..10557)
DNA (390bp) protein (130aa)
Sulfur relay protein TusC/DsrF n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DJ97_9GAMM
dsrF_[H]; tRNA 5-methylaminomethyl-2-thiouridine synthase TusC Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
sulfur oxidoreductase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10575..10967)
DNA (393bp) protein (131aa)
sulfur relay protein TusD/DsrE; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Intracellular sulfur oxidation protein DsrE n=1 Tax=uncultured bacterium ws156A7 RepID=I1X4S1_9BACT
intracellular sulfur oxidation protein DsrE
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11408..12481)
DNA (1074bp) protein (358aa)
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Reverse-type dissimilatory sulfite reductase (RDSR), beta subunit (DsrB) n=1 Tax=uncultured bacterium ws156A7 RepID=I1X4S0_9BACT
sulfite reductase, dissimilatory-type subunit beta
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_4245_14
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12606..13895)
DNA (1290bp) protein (430aa)
dsrA; DsrA protein (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
dsrA; DsrA protein (EC:1.8.99.3)
Reverse-type dissimilatory sulfite reductase (RDSR), alpha subunit (DsrA) n=1 Tax=uncultured bacterium ws643C1 RepID=I1X533_9BACT
Displaying 14 items

View Taxonomy