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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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3..743
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000369ACF2
phosphate/phosphonate ABC transporter substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
phosphate/phosphonate ABC transporter substrate-binding protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(771..1967)
DNA (1197bp) protein (399aa)
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
ubiquinone biosynthesis protein UbiH n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000370D3C8
ubiquinone biosynthesis hydroxylase UbiH/UbiF/VisC/COQ6
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2066..3472)
DNA (1407bp) protein (469aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Peptidase M24 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2R1_NITHN
peptidase M24
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3531..3737
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2Q9_NITHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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3739..4050
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G154_9GAMM
cell division protein ZapA; K09888 cell division protein ZapA Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
cell division protein ZapA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4386..4886
DNA (501bp) protein (167aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2) Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Putative 5-formyltetrahydrofolate cyclo-ligase family protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I204_PSEUO
5-formyltetrahydrofolate cyclo-ligase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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4905..5726
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037A0D63
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
metallophosphoesterase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6168..6764
DNA (597bp) protein (199aa)
Peptidyl-prolyl cis-trans isomerase ppiB (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Peptidyl-prolyl cis-trans isomerase ppiB (EC:5.2.1.8)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00035D630B
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..7554)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003609760
transposase IS200-family protein; K07491 putative transposase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
transposase IS200-family protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7632..8222)
DNA (591bp) protein (197aa)
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_11
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8381..9892)
DNA (1512bp) protein (504aa)
threonine dehydratase (EC:4.3.1.19)
L-threonine dehydratase biosynthetic IlvA n=1 Tax=Azoarcus toluclasticus RepID=UPI000374240E
ilvA; threonine dehydratase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10088..10744
DNA (657bp) protein (219aa)
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SEL8_THISK
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11051..12358
DNA (1308bp) protein (436aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2C8_NITHN
oxidoreductase FAD/NAD(P)-binding domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein rbh
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_14
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12363..12773
DNA (411bp) protein (137aa)
Peptidoglycan-binding LysM n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2C7_NITHN
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ADE14786.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_15
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12948..13805
DNA (858bp) protein (286aa)
Formate/nitrite transporter superfamily n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N8Q8_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_36100_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13802..16672)
DNA (2871bp) protein (957aa)
P-type HAD superfamily ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Probable calcium-transporting ATPase id=4128126 bin=GWF2_Nitrospirae_44_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
P-type HAD superfamily ATPase
Displaying 16 items

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