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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_1
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1022)
DNA (1020bp) protein (340aa)
class I and II aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
aspartate aminotransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000370E9C8
class I and II aminotransferase
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1178..1564
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Z3_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1668..2708)
DNA (1041bp) protein (347aa)
RNA polymerase sigma factor RpoS n=1 Tax=Cellvibrio sp. BR RepID=I3ICI1_9GAMM
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RNA polymerase sigma factor RpoS
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2711..3646)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii AMC35 RepID=K1IK06_9GAMM
lipoprotein NlpD; K06194 lipoprotein NlpD Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
lipoprotein NlpD
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3649..4293)
DNA (645bp) protein (215aa)
pcm; protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034AF21D
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4340..5086)
DNA (747bp) protein (249aa)
stationary-phase survival protein SurE (EC:3.6.1.11); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
stationary-phase survival protein SurE (EC:3.6.1.11)
5'-nucleotidase SurE n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K8N0_NITWC
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_trna_2
unknown

Not on your lists

comp(5281..5354)
DNA (74bp)
transferRNA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5653..6012)
DNA (360bp) protein (120aa)
Transcriptional regulator, MerR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRU2_9GAMM
transcription regulator protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
transcription regulator protein
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6005..6349)
DNA (345bp) protein (115aa)
transcriptional regulator n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036EBEBD
integration host factor subunit alpha Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
integration host factor subunit alpha
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6386..8764)
DNA (2379bp) protein (793aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C007_NITHN
phenylalanyl-tRNA synthetase subunit beta
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8877..9908)
DNA (1032bp) protein (344aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FCP8_9GAMM
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10048..10407)
DNA (360bp) protein (120aa)
Ribosomal protein L20, bacterial-type n=1 Tax=mine drainage metagenome RepID=T0YU38_9ZZZZ
rplT; 50S ribosomal protein L20 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplT; 50S ribosomal protein L20
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10423..10620)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Thioalkalivibrio RepID=L0DWC1_THIND
LSU ribosomal protein L35p Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
LSU ribosomal protein L35p
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_13
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10689..11111)
DNA (423bp) protein (141aa)
Translation initiation factor IF-3 n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TCC5_PISSA
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RBG_16_Gammaproteobacteria_62_13__curated
infC; translation initiation factor IF-3
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_14
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11224..13149)
DNA (1926bp) protein (642aa)
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RBG_16_Gamma2_64_11_curated
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SVY1_9GAMM
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_trna_1
unknown

Not on your lists

comp(13345..13416)
DNA (72bp)
transferRNA
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_15
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13587..15617)
DNA (2031bp) protein (677aa)
excinuclease ABC subunit B n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367FB5A
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RBG_16_Gammaproteobacteria_62_13__curated
excinuclease ABC subunit B
RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_21204_16
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15681..16880
DNA (1200bp) protein (400aa)
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
Aminotransferase class I and II n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C014_NITHN
class I and II aminotransferase
Displaying 18 items

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