ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..250
DNA (249bp) protein (83aa)
Plasmid maintenance system antidote protein, XRE family protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AJL6_NITEC
XRE family plasmid maintenance system antidote protein Tax=RBG_16_Gamma2_65_34_curated
XRE family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

523..1560
DNA (1038bp) protein (346aa)
Thioredoxin SoxW n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4Q7_9GAMM
putative thioredoxin Tax=RBG_16_Gamma2_65_34_curated
putative thioredoxin
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_trna_1
unknown

Not on your lists

comp(1787..1870)
DNA (84bp)
transferRNA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1955..2956
DNA (1002bp) protein (334aa)
Glucokinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B385_9PROT
glucokinase Tax=RBG_16_Gamma2_65_34_curated
glucokinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3113..3541
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RT26_SPITD
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3641..4588)
DNA (948bp) protein (316aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X4M0_9NOST
Zn-dependent oxidoreductase, NADPH:quinone reductase Tax=RBG_16_Gamma2_65_34_curated
Zn-dependent oxidoreductase, NADPH:quinone reductase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5061..6656)
DNA (1596bp) protein (532aa)
Glycoside hydrolase/deacetylase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGP8_THEPS
glycoside hydrolase/deacetylase Tax=RBG_16_Gamma2_65_34_curated
glycoside hydrolase/deacetylase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6987..7892)
DNA (906bp) protein (302aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8135..8647
DNA (513bp) protein (171aa)
fbaB; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13) Tax=RBG_16_Gamma2_65_34_curated
fbaB; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2D8_9PROT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8626..8973
DNA (348bp) protein (116aa)
Ribosomal subunit interface protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIB8_NITSI
ribosomal subunit interface protein Tax=RBG_16_Gamma2_65_34_curated
ribosomal subunit interface protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9095..9769
DNA (675bp) protein (225aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17); K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] Tax=RBG_16_Gamma2_65_34_curated
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidylethanolamine N-methyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZI5_NITHN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10044..12890)
DNA (2847bp) protein (949aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW92_9PROT
AMP-dependent synthetase and ligase Tax=RBG_16_Gamma2_65_34_curated
AMP-dependent synthetase and ligase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12847..14364)
DNA (1518bp) protein (506aa)
glgA; glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RBG_16_Gamma2_65_34_curated
glgA; glycogen synthase (EC:2.4.1.21)
glycogen synthase n=1 Tax=Methylococcus capsulatus RepID=UPI00030B24D7
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14521..15876
DNA (1356bp) protein (452aa)
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=RBG_16_Gamma2_65_34_curated
glucose-1-phosphate adenylyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000369AA14
glgC; glucose-1-phosphate adenylyltransferase rbh
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16104..17801
DNA (1698bp) protein (566aa)
glycoside hydrolase n=1 Tax=Methylobacter marinus RepID=UPI00035C304C
glycoside hydrolase Tax=RBG_16_Gamma2_65_34_curated
glycoside hydrolase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18139..19599
DNA (1461bp) protein (487aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] Tax=RBG_16_Gamma2_65_34_curated
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ58_NITHN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19674..19820
DNA (147bp) protein (49aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19831..20058
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQB7_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20064..20294
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZW2_9GAMM
hypothetical protein; K07063 Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20288..20473
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQB6_9GAMM
Uncharacterized protein Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21448..24009)
DNA (2562bp) protein (854aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RBG_16_Gamma2_65_34_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AA28_ALKEH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24161..25216
DNA (1056bp) protein (352aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Gamma2_65_34_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BST9_9GAMM
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25259..26365
DNA (1107bp) protein (369aa)
Queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_16_Gamma2_65_34_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FFV4_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26578..26916
DNA (339bp) protein (113aa)
Preprotein translocase, YajC subunit n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E1M0_9GAMM
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RBG_16_Gamma2_65_34_curated
preprotein translocase subunit YajC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27023..28906
DNA (1884bp) protein (628aa)
Protein translocase subunit SecD n=2 Tax=Nitrosococcus oceani RepID=Q3J8N8_NITOC
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD Tax=RBG_16_Gamma2_65_34_curated
secD; preprotein translocase subunit SecD
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28916..29932
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00036B617C
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RBG_16_Gamma2_65_34_curated
secF; preprotein translocase subunit SecF
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30328..31794
DNA (1467bp) protein (489aa)
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T1_RAMTT
membrane protein Tax=RBG_16_Gamma2_65_34_curated
membrane protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31791..32450
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T0_RAMTT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32577..33968
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KYL0_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
carboxypeptidase regulatory-like domain protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_698_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34084..34812
DNA (729bp) protein (243aa)
Tax=RBG_16_Gamma2_65_34_curated
Displaying items 1-30 of 37 in total

View Taxonomy