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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2218)
DNA (2217bp) protein (739aa)
DEAD/DEAH box helicase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A48B1
type III restriction protein res subunit Tax=RBG_16_Gamma2_65_34_curated
type III restriction protein res subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2569..2928)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G941_GEOUR
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..3244)
DNA (324bp) protein (108aa)
DNA polymerase beta domain protein region n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG84_DESAR
DNA polymerase beta domain-containing protein region; K07075 Tax=RBG_16_Gamma2_65_34_curated
DNA polymerase beta domain-containing protein region
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3410..6409)
DNA (3000bp) protein (1000aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_16_Gamma2_65_34_curated
valyl-tRNA synthetase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C8FA8
valS; valyl-tRNA synthetase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6452..7474)
DNA (1023bp) protein (341aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7478..7897)
DNA (420bp) protein (140aa)
DNA polymerase III subunit HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] Tax=RBG_16_Gamma2_65_34_curated
DNA polymerase III chi subunit HolC n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9R8_NITWC
DNA polymerase III subunit HolC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7894..9402)
DNA (1509bp) protein (503aa)
Leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RBG_16_Gamma2_65_34_curated
leucyl aminopeptidase (EC:3.4.11.1)
multifunctional aminopeptidase A n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036E342A
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9617..10714
DNA (1098bp) protein (366aa)
Permease YjgP/YjgQ family protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G2H7_9GAMM
permease YjgP/YjgQ family protein; K07091 lipopolysaccharide export system permease protein Tax=RBG_16_Gamma2_65_34_curated
permease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10711..11778
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003696451
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein Tax=RBG_16_Gamma2_65_34_curated
permease YjgP/YjgQ
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12281..14284
DNA (2004bp) protein (668aa)
Cytochrome c assembly protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LDE4_MAGSM
cytochrome C assembly protein; K02198 cytochrome c-type biogenesis protein CcmF Tax=RBG_16_Gamma2_65_34_curated
cytochrome C assembly protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14303..14791
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003776D8B
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Gamma2_65_34_curated
cycL; Cytochrome c-type biogenesis protein cycL precursor
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14788..15678
DNA (891bp) protein (297aa)
Cytochrome c-type biogenesis protein CcmI n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKX2_AZOSU
cytochrome c-type biogenesis protein CcmI; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Gamma2_65_34_curated
cytochrome c-type biogenesis protein CcmI
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15855..16376)
DNA (522bp) protein (174aa)
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily n=1 Tax=Methylomicrobium album BG8 RepID=H8GH55_METAL
dsbE-1; thiol:disulfide interchange protein DsbE; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE Tax=RBG_16_Gamma2_65_34_curated
dsbE-1; thiol:disulfide interchange protein DsbE
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16373..16804)
DNA (432bp) protein (144aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSA2_9PROT
CcmE/CycJ protein; K02197 cytochrome c-type biogenesis protein CcmE Tax=RBG_16_Gamma2_65_34_curated
CcmE/CycJ protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16801..16971)
DNA (171bp) protein (57aa)
Putative heme exporter protein CcmD n=2 Tax=Methylococcus capsulatus RepID=Q60BP5_METCA
heme exporter protein CcmD; K02196 heme exporter protein D Tax=RBG_16_Gamma2_65_34_curated
heme exporter protein CcmD
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16968..17783)
DNA (816bp) protein (272aa)
Cytochrome c-type biogenesis protein CcmC n=2 Tax=Nitrosococcus oceani RepID=Q3JCI9_NITOC
cytochrome c-type biogenesis protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gamma2_65_34_curated
cytochrome c-type biogenesis protein CcmC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17923..18606)
DNA (684bp) protein (228aa)
Heme exporter protein B n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEX7_NITSI
heme exporter protein CcmB; K02194 heme exporter protein B Tax=RBG_16_Gamma2_65_34_curated
heme exporter protein CcmB
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18611..19225)
DNA (615bp) protein (205aa)
heme exporter protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41] Tax=RBG_16_Gamma2_65_34_curated
Heme exporter protein CcmA n=2 Tax=Allochromatium vinosum RepID=D3RVT2_ALLVD
heme exporter protein CcmA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_trna_3
unknown

Not on your lists

comp(19306..19378)
DNA (73bp)
transferRNA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19753..20349
DNA (597bp) protein (199aa)
Cytochrome c class I n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADU7_9PROT
soxE; cytochrome c class I Tax=RBG_16_Gamma2_65_34_curated
soxE; cytochrome c class I
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_trna_2
unknown

Not on your lists

comp(20595..20667)
DNA (73bp)
transferRNA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21023..21526
DNA (504bp) protein (168aa)
Ribosomal protein L11 methylase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WL41_9CYAN
50S ribosomal protein L11 methylase Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L11 methylase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22136..23002
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. A8 RepID=T0Q8X9_9BACI
group 1 glycosyl transferase Tax=RBG_16_Gamma2_65_34_curated
group 1 glycosyl transferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23021..24436
DNA (1416bp) protein (472aa)
Integral membrane protein MviN n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R724_9CYAN
integral membrane protein MviN Tax=RBG_16_Gamma2_65_34_curated
integral membrane protein MviN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24687..25373
DNA (687bp) protein (229aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3XYY3_SULBS
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Gamma2_65_34_curated
methylase involved in ubiquinone/menaquinone biosynthesis
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25373..26095
DNA (723bp) protein (241aa)
Methyltransferase type 11 n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VZL5_DESAO
type 11 methyltransferase Tax=RBG_16_Gamma2_65_34_curated
type 11 methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26985..27293
DNA (309bp) protein (103aa)
glycosyl transferase group 1 Tax=RBG_16_Gamma2_65_34_curated
Glycosyl transferase, group 1 id=2296521 bin=GWB2_Clostridiales_37_7 species=Crinalium epipsammum genus=Crinalium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
glycosyl transferase group 1
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27317..28435)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035E6B50
glycosyl transferase family protein Tax=RBG_16_Gamma2_65_34_curated
glycosyl transferase family protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28399..30261)
DNA (1863bp) protein (621aa)
asparagine synthase (EC:6.3.5.4) Tax=RBG_16_Gamma2_65_34_curated
asparagine synthase (EC:6.3.5.4) rbh
Asparagine synthetase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9W3_NITWC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_261_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30263..31474)
DNA (1212bp) protein (404aa)
Glycosyl transferase group 1 n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9W2_NITWC
group 1 glycosyl transferase Tax=RBG_16_Gamma2_65_34_curated
group 1 glycosyl transferase
Displaying items 1-30 of 43 in total

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