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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1069)
DNA (1068bp) protein (356aa)
Outer membrane efflux protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A8V0_ALKEH
outer membrane efflux protein Tax=RBG_16_Gamma2_65_34_curated
Outer membrane efflux protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..1498)
DNA (384bp) protein (128aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1586..2224
DNA (639bp) protein (213aa)
MOSC domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
MOSC domain containing protein id=2274851 bin=GWB2_Deltaproteobacteria_65_81 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
MOSC domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2221..2589
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8A9_NITMU
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2596..4416
DNA (1821bp) protein (607aa)
id=2907553 Tax=RBG_16_Gamma2_65_34_curated
id=2907553 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4461..5840)
DNA (1380bp) protein (460aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_16_Gamma2_65_34_curated
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KCA0_NITWC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6236..6574)
DNA (339bp) protein (113aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RBG_16_Gamma2_65_34_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Photobacterium angustum (strain S14 / CCUG 15956) RepID=Q1ZKB9_PHOAS
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6645..7904)
DNA (1260bp) protein (420aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.3
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Cellvibrio sp. BR RepID=I3IEX6_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7959..8633
DNA (675bp) protein (225aa)
UPF0758 protein Noc_0236 n=2 Tax=Nitrosococcus oceani RepID=Y236_NITOC
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RBG_16_Gamma2_65_34_curated
radC; DNA repair protein RadC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8799..9035
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNM4_SIDLE
50S ribosomal protein L28p; K02902 large subunit ribosomal protein L28 Tax=RBG_16_Gamma2_65_34_curated
ribosomal protein L28
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9050..9217
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Endozoicomonas elysicola RepID=UPI00036C02C7
rpmG; 50S ribosomal protein L33 Tax=RBG_16_Gamma2_65_34_curated
rpmG; 50S ribosomal protein L33
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9410..10075)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YDV9_9DELT
cyclic nucleotide-binding: regulatory protein, Crp Tax=RBG_16_Gamma2_65_34_curated
cyclic nucleotide-binding: regulatory protein, Crp
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10371..10970
DNA (600bp) protein (200aa)
HNH endonuclease n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DFI5_9GAMM
HNH endonuclease family protein Tax=RBG_16_Gamma2_65_34_curated
HNH endonuclease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11994..12515
DNA (522bp) protein (174aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12537..14240
DNA (1704bp) protein (568aa)
hypothetical protein; K00688 starch phosphorylase [EC:2.4.1.1] Tax=RBG_16_Gamma2_65_34_curated
alpha-glucan phosphorylase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B634E6
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14186..14326
DNA (141bp) protein (47aa)
hypothetical protein; K00688 starch phosphorylase [EC:2.4.1.1] Tax=RBG_16_Gamma2_65_34_curated
Putative uncharacterized protein id=3897382 bin=GWC2_Nitrospirae-rel_56_14 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14467..14715
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2H0_NITHN
hypothetical protein; K08982 putative membrane protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15659..16264
DNA (606bp) protein (202aa)
Methyltransferase type 11 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C303_NITHN
type 11 methyltransferase Tax=RBG_16_Gamma2_65_34_curated
type 11 methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..16809
DNA (423bp) protein (141aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Putative uncharacterized protein id=3897367 bin=GWC2_Nitrospirae-rel_56_14 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16938..17366)
DNA (429bp) protein (143aa)
cyclase n=1 Tax=Thioalkalivibrio sp. ARh3 RepID=UPI000371B8BC
cyclase/dehydrase Tax=RBG_16_Gamma2_65_34_curated
cyclase/dehydrase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17603..17848
DNA (246bp) protein (82aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4) Tax=RBG_16_Gamma2_65_34_curated
Copper/silver-translocating P-type ATPase id=4445033 bin=GWC2_Nitrospirae-rel_56_14 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
copA; copper-transporting ATPase
Displaying 21 items

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