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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222..1232)
DNA (1011bp) protein (337aa)
iron deficiency-induced protein A n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C8C72
ABC transporter iron binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RBG_16_Gamma2_65_34_curated
ABC transporter iron binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1949..2779
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JT24_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2776..3543)
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III Xth n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9G1_9PROT
exodeoxyribonuclease III Xth Tax=RBG_16_Gamma2_65_34_curated
exodeoxyribonuclease III Xth
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3597..4100)
DNA (504bp) protein (168aa)
Glutaredoxin n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X474_THIK1
glutaredoxin Tax=RBG_16_Gamma2_65_34_curated
glutaredoxin
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4104..4694)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WYP6_HALHL
hypothetical protein; K07184 SH3 domain protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4708..6759)
DNA (2052bp) protein (684aa)
oligopeptidase A (EC:3.4.24.70); K01414 oligopeptidase A [EC:3.4.24.70] Tax=RBG_16_Gamma2_65_34_curated
oligopeptidase A (EC:3.4.24.70)
Oligopeptidase A n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVL3_NITHN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6829..7824
DNA (996bp) protein (332aa)
Serine/threonine protein kinase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYM2_9BURK
serine/threonine protein kinase Tax=RBG_16_Gamma2_65_34_curated
serine/threonine protein kinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7958..8485
DNA (528bp) protein (176aa)
Carbonic anhydrase2C family 3 n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDC9_9GAMM
transferase Tax=RBG_16_Gamma2_65_34_curated
hexapeptide repeat-containing transferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8666..8857
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0W2_9BACT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..9177
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JF69_9ARCH
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9508..10152)
DNA (645bp) protein (215aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11623..12462)
DNA (840bp) protein (280aa)
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RBG_16_Gamma2_65_34_curated
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9A6_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13192)
DNA (684bp) protein (228aa)
hypothetical protein, partial n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C32
hypothetical protein; K07018 Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13384..14397)
DNA (1014bp) protein (338aa)
Sodium/calcium exchanger n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XQM1_9GAMM
sodium/calcium exchanger; K07301 inner membrane protein Tax=RBG_16_Gamma2_65_34_curated
sodium/calcium exchanger
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14470..15168)
DNA (699bp) protein (233aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037FDCA6
glutathione S-transferase-like protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15291..16148)
DNA (858bp) protein (286aa)
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_16_Gamma2_65_34_curated
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B63103
4-hydroxybenzoate polyprenyl transferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16145..16729)
DNA (585bp) protein (195aa)
chorismate-pyruvate lyase (EC:4.1.3.40)
Probable chorismate pyruvate-lyase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FEN3_9GAMM
chorismate--pyruvate lyase Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16893..17381
DNA (489bp) protein (163aa)
id=3135456 Tax=RBG_16_Gamma2_65_34_curated
id=3135456 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17692..19824)
DNA (2133bp) protein (711aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RBG_16_Gamma2_65_34_curated
ATP-dependent DNA helicase RecG n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036774C1
ATP-dependent DNA helicase RecG
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19859..20302)
DNA (444bp) protein (148aa)
Endoribonuclease L-PSP n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E2C9_9GAMM
endoribonuclease L-PSP; K07567 TdcF protein Tax=RBG_16_Gamma2_65_34_curated
endoribonuclease L-PSP
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20415..22685)
DNA (2271bp) protein (757aa)
GTP diphosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RBG_16_Gamma2_65_34_curated
GTP diphosphokinase (EC:2.7.6.5)
bifunctional (p)ppGpp synthetase II/ guanosine-3'''',5''''-bis pyrophosphate 3''''-pyrophosphohydrolase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000360D46C
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23056..23661)
DNA (606bp) protein (202aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RBG_16_Gamma2_65_34_curated
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Pseudomonas putida LF54 RepID=U2U6T1_PSEPU
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23969..24835)
DNA (867bp) protein (289aa)
TIGR00255 family protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z7M9_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24931..25947
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037BB9AA
putative serine/threonine protein kinase Tax=RBG_16_Gamma2_65_34_curated
putative serine/threonine protein kinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25944..26807
DNA (864bp) protein (288aa)
Ser/Thr phosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIL1_9PROT
Ser/Thr phosphatase Tax=RBG_16_Gamma2_65_34_curated
Ser/Thr phosphatase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27043..27762
DNA (720bp) protein (240aa)
rph; RNase PH (EC:2.7.7.56) Tax=RBG_16_Gamma2_65_34_curated
rph; RNase PH (EC:2.7.7.56)
ribonuclease PH n=1 Tax=Endozoicomonas elysicola RepID=UPI0003743B47
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27906..28508
DNA (603bp) protein (201aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E1E8_9GAMM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Tax=RBG_16_Gamma2_65_34_curated
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1852_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28758..32096
DNA (3339bp) protein (1113aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036D5A96
amtE; ammonia permease; K03320 ammonium transporter, Amt family Tax=RBG_16_Gamma2_65_34_curated
amtE; ammonia permease
Displaying 29 items

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