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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204..410
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82V39_NITEU
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..787
DNA (225bp) protein (75aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

865..1533
DNA (669bp) protein (223aa)
lepB2; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gamma2_65_34_curated
Signal peptidase I (EC:3.4.21.89) rbh
Signal peptidase I n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AAE0_COLFT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1738..2475
DNA (738bp) protein (246aa)
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RBG_16_Gamma2_65_34_curated
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUT2_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2565..3416)
DNA (852bp) protein (284aa)
UPF0173 metal-dependent hydrolase SCD_n01867 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACL1_9PROT
beta-lactamase Tax=RBG_16_Gamma2_65_34_curated
beta-lactamase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3445..4134)
DNA (690bp) protein (230aa)
id=1868369 Tax=RBG_16_Gamma2_65_34_curated
id=1868369 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4260..5027
DNA (768bp) protein (256aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FMJ2_PHAMO
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gamma2_65_34_curated
ABC transporter, ATP-binding subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5845
DNA (822bp) protein (274aa)
ABC-2 n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZ31_METFK
hypothetical protein; K09686 antibiotic transport system permease protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein rbh
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6032..6259
DNA (228bp) protein (76aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6352..6828
DNA (477bp) protein (159aa)
Cytochrome c, class II n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9H5_ALKEH
cytochrome c, class II Tax=RBG_16_Gamma2_65_34_curated
cytochrome c, class II
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6860..7765
DNA (906bp) protein (302aa)
cytochrome C n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035FFCB8
cycG_[H]; Putative diheme cytochrome c-553 Tax=RBG_16_Gamma2_65_34_curated
cycG_[H]; Putative diheme cytochrome c-553
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_trna_3
unknown

Not on your lists

comp(7811..7882)
DNA (72bp)
transferRNA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8018..9178
DNA (1161bp) protein (387aa)
Cytochrome b n=1 Tax=Beggiatoa alba B18LD RepID=I3CCV0_9GAMM
cytochrome B561 Tax=RBG_16_Gamma2_65_34_curated
cytochrome b
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9183..9584
DNA (402bp) protein (134aa)
Cytochrome c-type protein Shp n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2E5_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9611..10159
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036F35D9
Diheme Cytochrome C Tax=RBG_16_Gamma2_65_34_curated
diheme cytochrome c
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10221..11636
DNA (1416bp) protein (472aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Gamma2_65_34_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase 2 n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=SYE2_METCA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_trna_1
unknown

Not on your lists

11681..11753
DNA (73bp)
transferRNA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4187_trna_2
unknown

Not on your lists

11875..11947
DNA (73bp)
transferRNA
Displaying 18 items

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