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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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467..1096
DNA (630bp) protein (210aa)
Cytochrome c4 n=2 Tax=sulfur-oxidizing symbionts RepID=G2FGZ5_9GAMM
cytochrome c4 Tax=RBG_16_Gamma2_65_34_curated
cytochrome c4
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1524..1760
DNA (237bp) protein (79aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2050..3330)
DNA (1281bp) protein (427aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RBG_16_Gamma2_65_34_curated
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=GSA_HAHCH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3432..3851)
DNA (420bp) protein (140aa)
twitching motility protein PilT n=1 Tax=Leucothrix mucor RepID=UPI0003B768B7
PilT protein domain-containing protein; K07062 Tax=RBG_16_Gamma2_65_34_curated
VapC toxin protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3961..4077)
DNA (117bp) protein (39aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4188..4829)
DNA (642bp) protein (214aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RBG_16_Gamma2_65_34_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BEM7_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..5640)
DNA (822bp) protein (274aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RBG_16_Gamma2_65_34_curated
phosphomethylpyrimidine kinase (EC:2.7.4.7)
phosphomethylpyrimidine kinase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036C6A06
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5637..6611)
DNA (975bp) protein (325aa)
hemH; ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RBG_16_Gamma2_65_34_curated
Ferrochelatase n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4I0E4_MICAE
ferrochelatase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6705..6875
DNA (171bp) protein (57aa)
Rubredoxin n=2 Tax=Stenotrophomonas maltophilia RepID=B2FT33_STRMK
rubA; putative rubredoxin Tax=RBG_16_Gamma2_65_34_curated
rubA; rubredoxin
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6899..8170)
DNA (1272bp) protein (424aa)
membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BABC
membrane protein involved in aromatic hydrocarbon degradation Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8472..8828
DNA (357bp) protein (119aa)
id=2742041 Tax=RBG_16_Gamma2_65_34_curated
id=2742041 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8918..10540)
DNA (1623bp) protein (541aa)
Sensory box sigma-54 dependent DNA-binding response regulator n=2 Tax=Geobacillus RepID=A4IQQ7_GEOTN
sensory box sigma-54 dependent DNA-binding response regulator Tax=RBG_16_Gamma2_65_34_curated
sensory box sigma-54 dependent DNA-binding response regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10667..11701)
DNA (1035bp) protein (345aa)
3-ketoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RBG_16_Gamma2_65_34_curated
3-ketoacyl-ACP synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q909_9ENTR
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12053..13462)
DNA (1410bp) protein (470aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13888..16374
DNA (2487bp) protein (829aa)
hypothetical protein; K06445 acyl-CoA dehydrogenase [EC:1.3.99.-] Tax=RBG_16_Gamma2_65_34_curated
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CT04_SIDLE
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17139..17777
DNA (639bp) protein (213aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_16_Gamma2_65_34_curated
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K8J1_NITWC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17783..19816
DNA (2034bp) protein (678aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RBG_16_Gamma2_65_3
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVY5_NITHN
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_9261_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20137..21837
DNA (1701bp) protein (567aa)
AMP-dependent synthetase and ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_16_Gamma2_65_34_curated
AMP-dependent synthetase and ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UE1_NITEU
Displaying 18 items

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