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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117..863
DNA (747bp) protein (249aa)
dsbC; thiol:disulfide interchange protein (EC:5.3.4.1); K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=RBG_16_Gamma2_65_34_curated
Protein-disulfide isomerase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SV08_9GAMM
protein-disulfide isomerase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1010..1999
DNA (990bp) protein (330aa)
GGDEF domain protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N6Q6_9GAMM
diguanylate cyclase with GAF sensor Tax=RBG_16_Gamma2_65_34_curated
diguanylate cyclase with GAF sensor
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2520..2843)
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WXL0_HALHL
4Fe-4S ferredoxin; K05524 ferredoxin Tax=RBG_16_Gamma2_65_34_curated
4Fe-4S ferredoxin
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3178..4845
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJG8_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5132..6184
DNA (1053bp) protein (351aa)
nitrite reductase, copper-containing protein (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] Tax=RBG_16_Gamma2_65_34_curated
nitrite reductase, copper-containing protein (EC:1.7.2.1)
Nitrite reductase, copper-containing protein id=2028492 bin=GWB2_Chloroflexi_49_20 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6310..7107)
DNA (798bp) protein (266aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25) Tax=RBG_16_Gamma2_65_34_curated
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI000371ABA9
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7227..7952
DNA (726bp) protein (242aa)
tRNA/rRNA methyltransferase; K15396 tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] Tax=RBG_16_Gamma2_65_34_curated
tRNA/rTrmH family RNA methyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6V3_9GAMM
RNA methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8006..8800
DNA (795bp) protein (265aa)
Serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=RBG_16_Gamma2_65_34_curated
Serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CFQ8_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8858..9313
DNA (456bp) protein (152aa)
Iron-sulfur cluster assembly transcription factor IscR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3R5_NITHN
iron-sulfur cluster assembly transcription factor IscR; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=RBG_16_Gamma2_65_34_curated
iron-sulfur cluster assembly transcription factor IscR
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9344..10492
DNA (1149bp) protein (383aa)
cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RBG_16_Gamma2_65_34_curated
Cysteine desulfurase family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLU0_AZOSU
cysteine desulfurase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10532..11746
DNA (1215bp) protein (405aa)
cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RBG_16_Gamma2_65_34_curated
Cysteine desulfurase n=1 Tax=Beggiatoa sp. PS RepID=A7BXG8_9GAMM
cysteine desulfurase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11849..12259
DNA (411bp) protein (137aa)
FeS cluster assembly scaffold IscU n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WXC9_METML
FeS cluster assembly scaffold IscU; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_Gamma2_65_34_curated
FeS cluster assembly scaffold IscU
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12318..12641
DNA (324bp) protein (108aa)
iron-sulfur cluster assembly protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003717C72
iron-sulfur cluster assembly protein; K13628 iron-sulfur cluster assembly protein Tax=RBG_16_Gamma2_65_34_curated
iron-sulfur cluster assembly protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12656..13186
DNA (531bp) protein (177aa)
Co-chaperone protein HscB homolog n=2 Tax=sulfur-oxidizing symbionts RepID=G2DEA6_9GAMM
co-chaperone HscB; K04082 molecular chaperone HscB Tax=RBG_16_Gamma2_65_34_curated
molecular chaperone HscB
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13263..15263
DNA (2001bp) protein (667aa)
Chaperone protein HscA homolog n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHA9_9GAMM
2-alkenal reductase; K04044 molecular chaperone HscA Tax=RBG_16_Gamma2_65_34_curated
chaperone protein HscA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15265..15603
DNA (339bp) protein (113aa)
2Fe-2S ferredoxin n=1 Tax=Lamprocystis purpurea RepID=UPI00037F44F9
fdx; ferredoxin; K04755 ferredoxin, 2Fe-2S Tax=RBG_16_Gamma2_65_34_curated
ferredoxin 2Fe-2S
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15618..15821
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B531C0
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
conserved hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15978..16409
DNA (432bp) protein (144aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Gamma2_65_34_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036BD8D9
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16406..17518
DNA (1113bp) protein (371aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gamma2_65_34_curated
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ51_NITHN
radical SAM protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17515..18294
DNA (780bp) protein (260aa)
Tfp pilus assembly protein PilF n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T1Q0_9GAMM
tfp pilus assembly protein PilF; K02656 type IV pilus assembly protein PilF Tax=RBG_16_Gamma2_65_34_curated
tfp pilus assembly protein PilF
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18297..19175
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003740515
transcriptional regulator; K15539 cytoskeleton protein RodZ Tax=RBG_16_Gamma2_65_34_curated
transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19165..20295
DNA (1131bp) protein (377aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gamma2_65_34_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036C6FC6
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20336..21580
DNA (1245bp) protein (415aa)
Histidine--tRNA ligase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RBG_16_Gamma2_65_34_curated
histidine--tRNA ligase (EC:6.1.1.21)
histidyl-tRNA synthetase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000372CFDD
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21612..22250
DNA (639bp) protein (213aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Putative membrane protein id=1373442 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22247..23395
DNA (1149bp) protein (383aa)
Outer membrane protein assembly factor BamB n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCS4_9GAMM
yfgL; outer membrane assembly lipoprotein YfgL Tax=RBG_16_Gamma2_65_34_curated
yfgL; outer membrane assembly lipoprotein YfgL
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23442..24872
DNA (1431bp) protein (477aa)
GTPase Der n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BXK7_9GAMM
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=RBG_16_Gamma2_65_34_curated
engA; GTP-binding protein EngA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25021..27114
DNA (2094bp) protein (698aa)
Serine/threonine protein kinase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8Y6_MAGSM
serine/threonine protein kinase Tax=RBG_16_Gamma2_65_34_curated
WD40 repeat-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27158..28042)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036F416E
peptidase M23 Tax=RBG_16_Gamma2_65_34_curated
peptidase M23
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28032..29408)
DNA (1377bp) protein (459aa)
Exodeoxyribonuclease VII (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RBG_16_Gamma2_65_34_curated
exodeoxyribonuclease VII (EC:3.1.11.6)
exodeoxyribonuclease VII large subunit n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036761F6
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_831_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29487..29789)
DNA (303bp) protein (101aa)
Tax=RBG_16_Gamma2_65_34_curated
Displaying items 1-30 of 47 in total

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