ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227..1576
DNA (1350bp) protein (450aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RBG_16_Gamma2_65_34_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RIMO_NITMU
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1675..2358
DNA (684bp) protein (228aa)
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] Tax=RBG_16_Gamma2_65_34_curated
Peptidyl-prolyl cis-trans isomerase id=4910243 bin=GWC2_Nitrospirae_57_13 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
FKBP-type peptidylprolyl cis-trans isomerase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2396..3202
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036CFEB8
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3510..4190)
DNA (681bp) protein (227aa)
enolase (EC:3.1.3.77); K09880 enolase-phosphatase E1 [EC:3.1.3.77] Tax=RBG_16_Gamma2_65_34_curated
enolase (EC:3.1.3.77)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003752D5B
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4202..4606)
DNA (405bp) protein (135aa)
PilT protein domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
PilT protein-like id=4892448 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PilT protein domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4617..4781)
DNA (165bp) protein (55aa)
AbrB family transcriptional regulator n=1 Tax=Anabaena sp. 90 RepID=K7WX50_9NOST
AbrB family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
AbrB family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4923..6107)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C462_NITHN
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6158..6931
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJA9_9GAMM
dehydrogenase Tax=RBG_16_Gamma2_65_34_curated
dehydrogenase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6935..7429)
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RBG_16_Gamma2_65_34_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C463_NITHN
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7544..7903)
DNA (360bp) protein (120aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=RBG_16_Gamma2_65_34_curated
Dihydroneopterin aldolase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GNM0_9GAMM
dihydroneopterin aldolase family protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8005..8589
DNA (585bp) protein (195aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RBG_16_Gamma2_65_34_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=PLSY_METCA
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8586..9629)
DNA (1044bp) protein (348aa)
DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gamma2_65_34_curated
UGMP family protein n=1 Tax=Oceanimonas smirnovii RepID=UPI000367BEBF
DNA-binding/iron metalloprotein/AP endonuclease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9737..9988
DNA (252bp) protein (84aa)
30S ribosomal protein S21 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JPE1_9GAMM
30S ribosomal protein S21 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S21
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10013..10459
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ18_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10514..12289
DNA (1776bp) protein (592aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RBG_16_Gamma2_65_34_curated
DNA primase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BR57_9GAMM
DNA primase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6050_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12397..14124
DNA (1728bp) protein (576aa)
RNA polymerase sigma factor RpoD n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368A0EB
RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gamma2_65_34_curated
RNA polymerase sigma-70 subunit RpoD
Displaying 16 items

View Taxonomy