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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Signal transduction histidine kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNZ6_AZOSU
signal transduction histidine kinase Tax=RBG_16_Gamma2_65_34_curated
signal transduction histidine kinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542..1264)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQI8_AZOS1
hypothetical protein; K09134 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1362..1865)
DNA (504bp) protein (168aa)
hypothetical protein, partial n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037BCEDA
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L17P
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1868..2887)
DNA (1020bp) protein (340aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Gamma2_65_34_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=131 Tax=Pseudomonas RepID=RPOA_PSEA7
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2916..3542)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS4_NITMU
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Gamma2_65_34_curated
rpsD; 30S ribosomal protein S4
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3674..4087)
DNA (414bp) protein (138aa)
30S ribosomal protein S11 n=2 Tax=Pseudogulbenkiania RepID=G2IW68_PSEUL
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S11
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4108..4488)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLQ8_9PROT
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Gamma2_65_34_curated
rpsM; 30S ribosomal protein S13
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4598..4711)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Sutterella RepID=E7H4U1_9BURK
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Gamma2_65_34_curated
rpmJ; 50S ribosomal protein L36
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4822..6168)
DNA (1347bp) protein (449aa)
Protein translocase subunit SecY n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCN5_9GAMM
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Gamma2_65_34_curated
secY; preprotein translocase subunit SecY
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6201..6635)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Singularimonas variicoloris RepID=UPI00036646F5
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L15
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6637..6837)
DNA (201bp) protein (67aa)
50S ribosomal protein L30 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP83_SIDLE
ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Gamma2_65_34_curated
ribosomal protein L30
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6848..7405)
DNA (558bp) protein (186aa)
30S ribosomal protein S5 n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TMJ1_PISSA
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Gamma2_65_34_curated
rpsE; 30S ribosomal protein S5
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7374..7730)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Cellvibrio sp. BR RepID=I3I692_9GAMM
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Gamma2_65_34_curated
rplR; 50S ribosomal protein L18
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7746..8279)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J2B0_PSEPS
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Gamma2_65_34_curated
rplF; 50S ribosomal protein L6
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8293..8688)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RS8_AZOSB
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S8
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8792..9097)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036701EA
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S14
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9084..9641)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=RL5_PSYIN
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Gamma2_65_34_curated
rplE; 50S ribosomal protein L5
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9651..9974)
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCP4_9GAMM
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Gamma2_65_34_curated
rplX; 50S ribosomal protein L24
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10117..10485)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Idiomarina sp. A28L RepID=F7RVG5_9GAMM
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L14
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10563..10832)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YGA5_THIV6
30S ribosomal protein S17 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S17
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10829..11032)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2G013_OCESG
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L29
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11046..11456)
DNA (411bp) protein (137aa)
50S ribosomal protein L16 n=1 Tax=Nevskia ramosa RepID=UPI0003B6AFC0
LSU ribosomal protein L16P Tax=RBG_16_Gamma2_65_34_curated
LSU ribosomal protein L16P
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11548..12225)
DNA (678bp) protein (226aa)
30S ribosomal protein S3 n=1 Tax=Methylomicrobium buryatense RepID=UPI00034894D1
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gamma2_65_34_curated
rpsC; 30S ribosomal protein S3
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12225..12593)
DNA (369bp) protein (123aa)
50S ribosomal protein L22 n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RL22_ALKEH
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Gamma2_65_34_curated
rplV; large subunit ribosomal protein L22
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12597..12884)
DNA (288bp) protein (96aa)
30S ribosomal protein S19 n=1 Tax=uncultured bacterium RepID=K2ETY6_9BACT
rpsS; 30S ribosomal protein S19 Tax=RBG_16_Gamma2_65_34_curated
rpsS; 30S ribosomal protein S19
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12898..13722)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9P5_9PROT
rplB; 50S ribosomal protein L2 Tax=RBG_16_Gamma2_65_34_curated
rplB; 50S ribosomal protein L2
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13736..14032)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Leeia oryzae RepID=UPI00037BA4A8
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_16_Gamma2_65_34_curated
rplW; 50S ribosomal protein L23
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14029..14646)
DNA (618bp) protein (206aa)
50S ribosomal protein L4 n=1 Tax=Halomonas lutea RepID=UPI000363805B
rplD; 50S ribosomal protein L4 Tax=RBG_16_Gamma2_65_34_curated
rplD; 50S ribosomal protein L4
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14733..15386)
DNA (654bp) protein (218aa)
50S ribosomal protein L3 n=1 Tax=Methylotenera mobilis RepID=UPI000377A273
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L3
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_6764_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15499..15810)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BCA6A
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Gamma2_65_34_curated
rpsJ; 30S ribosomal protein S10
Displaying 30 items

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