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RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_1
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2..646
DNA (645bp) protein (215aa)
hypothetical protein; K07090 Tax=RBG_16_Nitrospirae_43_8_curated
Putative uncharacterized protein id=3967283 bin=GWF2_Nitrospirae_44_13 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_2
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

707..2413
DNA (1707bp) protein (569aa)
multi-sensor signal transduction histidine kinase Tax=RBG_16_Nitrospirae_43_8_curated
Integral membrane sensor signal transduction histidine kinase id=2227613 bin=GWB2_Nitrospirae_rel_47_37 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
multi-sensor signal transduction histidine kinase
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_3
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2447..3805
DNA (1359bp) protein (453aa)
transcriptional regulatory protein pilR Tax=RBG_16_Nitrospirae_43_8_curated
Response regulator receiver id=4042953 bin=GWC2_Ignavibacteria_38_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
transcriptional regulatory protein pilR
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_4
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

3824..4111
DNA (288bp) protein (96aa)
id=4043050 Tax=RBG_16_Nitrospirae_43_8_curated
id=4043050 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_5
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(4095..4628)
DNA (534bp) protein (178aa)
Uncharacterized protein id=4043051 bin=GWC2_Ignavibacteria_38_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_6
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(4625..5350)
DNA (726bp) protein (242aa)
Conserved domain protein id=4043053 bin=GWC2_Ignavibacteria_38_9 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_7
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(6507..6842)
DNA (336bp) protein (112aa)
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
Putative uncharacterized protein id=3967221 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_8
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(6912..7238)
DNA (327bp) protein (109aa)
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
Putative uncharacterized protein id=3967219 bin=GWF2_Nitrospirae_44_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_9
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(7386..8273)
DNA (888bp) protein (296aa)
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
Putative uncharacterized protein id=3967216 bin=GWF2_Nitrospirae_44_13 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_10
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(8284..9285)
DNA (1002bp) protein (334aa)
potassium uptake protein, TrkA family Tax=RBG_16_Nitrospirae_43_8_curated
Potassium uptake protein, TrkA family id=3967214 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
TrkA family potassium uptake protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_11
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(9777..10916)
DNA (1140bp) protein (380aa)
soluble hydrogenase 42 kDa subunit (EC:1.12.-.-) Tax=RBG_16_Nitrospirae_43_8_curated
soluble hydrogenase 42 kDa subunit (EC:1.12.-.-)
Soluble hydrogenase 42 kDa subunit id=3967211 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_12
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11046..11387
DNA (342bp) protein (114aa)
diadenosine tetraphosphate (Ap4A) hydrolase; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Nitrospirae_43_8_curated
Diadenosine tetraphosphate (Ap4A) hydrolase id=3967209 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
diadenosine tetraphosphate (Ap4A) hydrolase
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_13
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11434..11685
DNA (252bp) protein (84aa)
Glutaredoxin n=1 Tax=delta proteobacterium NaphS2 RepID=D8FEQ2_9DELT
glutaredoxin Tax=RBG_16_Nitrospirae_43_8_curated
glutaredoxin
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_14
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11687..12007
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF47_SYNFM
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_15
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(12016..13254)
DNA (1239bp) protein (413aa)
ATP/GTP-binding domain protein; K07478 putative ATPase Tax=RBG_16_Nitrospirae_43_8_curated
ATP/GTP-binding domain protein id=3967207 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ATP/GTP-binding domain-containing protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_16
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(14178..15116)
DNA (939bp) protein (313aa)
pyrD; dihydroorotate oxidase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_16_Nitrospirae_43_8_curated
pyrD; dihydroorotate oxidase (EC:1.3.3.1)
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit id=4127847 bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_17
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(15107..15898)
DNA (792bp) protein (264aa)
dihydroorotate dehydrogenase electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RBG_16_Nitrospirae_43_8_curated
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit id=4127846 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
dihydroorotate dehydrogenase electron transfer subunit
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_18
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(15891..16364)
DNA (474bp) protein (158aa)
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RBG_16_Nitrospirae_43_8_curated
Transcription elongation factor GreA id=4127845 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
transcription elongation factor GreA
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_19
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

16825..17232
DNA (408bp) protein (136aa)
purine phosphorylase family protein 1 Tax=RBG_16_Nitrospirae_43_8_curated
Futalosine nucleosidase id=4127844 bin=GWF2_Nitrospirae_44_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mqnB; futalosine hydrolase
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_20
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

17352..18515
DNA (1164bp) protein (388aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RBG_16_Nitrospirae_43_8_curated
Cysteine desulfurase NifS id=4127838 bin=GWF2_Nitrospirae_44_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cysteine desulfurase NifS
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_21
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(18573..20048)
DNA (1476bp) protein (492aa)
organic solvents resistance ABC transporter periplasmic protein; K02067 putative ABC transport system substrate-binding protein Tax=RBG_16_Nitrospirae_43_8_curated
Mammalian cell entry related domain protein id=4127837 bin=GWF2_Nitrospirae_44_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
organic solvents resistance ABC transporter periplasmic protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_22
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(20060..20803)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RBG_16_Nitrospirae_43_8_curated
ABC transporter, ATP-binding protein id=4127836 bin=GWF2_Nitrospirae_44_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ABC transporter ATP-binding protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_23
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(20818..21624)
DNA (807bp) protein (269aa)
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
Putative integral membrane protein id=4127835 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RBG_16_Nitrospirae_43_8_RBG_16_scaffold_18275_24
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(21617..22687)
DNA (1071bp) protein (357aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RBG_16_Nitrospirae_43_8_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase id=4127834 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Displaying 24 items

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