ggKbase home page

RBG_16_NSX_64_22_RBG_16_scaffold_6962

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_6962_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3..1634
DNA (1632bp) protein (544aa)
indole-3-pyruvate decarboxylase; K04103 indolepyruvate decarboxylase [EC:4.1.1.74] Tax=RBG_16_Nitrospirae_64_22_curated
Indole-3-pyruvate decarboxylase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIX5_GLOVI
indole-3-pyruvate decarboxylase
RBG_16_NSX_64_22_RBG_16_scaffold_6962_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1731..1844
DNA (114bp) protein (38aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_6962_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1913..2905
DNA (993bp) protein (331aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RBG_16_Nitrospirae_64_22_curated
riboflavin biosynthesis protein RibF
Riboflavin kinase and FAD synthetase id=4854264 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_NSX_64_22_RBG_16_scaffold_6962_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

2902..3927
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E5S4_GEOSM
hypothetical protein; K07027 Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_6962_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4050..5267)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P068_9BACT
hypothetical protein; K07133 Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_6962_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

5497..5964
DNA (468bp) protein (156aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_16_Nitrospirae_64_22_curated
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5LA87_9BACI
RpiB/LacA/LacB family sugar-phosphate isomerase
RBG_16_NSX_64_22_RBG_16_scaffold_6962_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

5957..6301
DNA (345bp) protein (115aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_Nitrospirae_64_22_curated
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAD8_AMMDK
RBG_16_NSX_64_22_RBG_16_scaffold_6962_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

6250..7215
DNA (966bp) protein (322aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_Nitrospirae_64_22_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=4127550 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RBG_16_NSX_64_22_RBG_16_scaffold_6962_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7403..7867
DNA (465bp) protein (155aa)
transcriptional regulator NrdR Tax=RBG_16_Nitrospirae_64_22_curated
Transcriptional repressor NrdR id=3322973 bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
transcriptional regulator NrdR
RBG_16_NSX_64_22_RBG_16_scaffold_6962_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7916..9277
DNA (1362bp) protein (454aa)
Electron transport complex protein RnfC n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S240_THEOJ
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC Tax=RBG_16_Nitrospirae_64_22_curated
RnfABCDGE type electron transport complex subunit C
RBG_16_NSX_64_22_RBG_16_scaffold_6962_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

9289..10317
DNA (1029bp) protein (343aa)
Electron transport complex protein RnfD n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L5G5_MAGSM
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD Tax=RBG_16_Nitrospirae_64_22_curated
electron transporter RnfD
RBG_16_NSX_64_22_RBG_16_scaffold_6962_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10314..10928
DNA (615bp) protein (205aa)
rnfG; electron transport complex protein RnfG; K03612 electron transport complex protein RnfG Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
Ion-translocating NADH:ferredoxin oxidoreductase complex Rnf, FMN-binding membrane protein subunit RnfG id=4729805 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_NSX_64_22_RBG_16_scaffold_6962_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10940..11644
DNA (705bp) protein (235aa)
RnfABCDGE type electron transport complex subunit E; K03613 electron transport complex protein RnfE Tax=RBG_16_Nitrospirae_64_22_curated
Ion-translocating NADH:ferredoxin oxidoreductase complex Rnf, membrane protein subunit RnfE id=4729804 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RnfABCDGE type electron transport complex subunit E
RBG_16_NSX_64_22_RBG_16_scaffold_6962_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

11653..12237
DNA (585bp) protein (195aa)
Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YXB0_9GAMM
rsxA; oxidoreductase, inner membrane protein; K03617 electron transport complex protein RnfA Tax=RBG_16_Nitrospirae_64_22_curated
rnfA; Electron transport complex protein rnfA
RBG_16_NSX_64_22_RBG_16_scaffold_6962_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12342..13424
DNA (1083bp) protein (361aa)
Electron transport complex protein RnfB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CT06_9CLOT
RnfABCDGE type electron transport complex subunit B Tax=RBG_16_Nitrospirae_64_22_curated
RnfABCDGE type electron transport complex subunit B
RBG_16_NSX_64_22_RBG_16_scaffold_6962_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13447..15762)
DNA (2316bp) protein (772aa)
Integral membrane protein-like protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMG1_OPITP
integral membrane protein Tax=RBG_16_Nitrospirae_64_22_curated
integral membrane protein
Displaying 16 items

View Taxonomy