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RBG_16_NSX_64_22_RBG_16_scaffold_8753

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_8753_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

RBG_16_NSX_64_22_RBG_16_scaffold_8753_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


172..324
DNA (153bp) protein (51aa)
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L33 id=4767585 bin=GWC2_Deltaproteobacteria_66_88 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
50S ribosomal protein L33
RBG_16_NSX_64_22_RBG_16_scaffold_8753_trna_1
unknown

Not on your lists

382..455
DNA (74bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_8753_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

484..669
DNA (186bp) protein (62aa)
Preprotein translocase, SecE subunit Tax=RBG_16_Nitrospirae_64_22_curated
Preprotein translocase, SecE subunit id=4674078 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RBG_16_NSX_64_22_RBG_16_scaffold_8753_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

704..1237
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKU4_DESB2
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RBG_16_Nitrospirae_64_22_curated
antitermination protein NusG
RBG_16_NSX_64_22_RBG_16_scaffold_8753_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


1256..1681
DNA (426bp) protein (142aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L11 id=4542379 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rplK; 50S ribosomal protein L11
RBG_16_NSX_64_22_RBG_16_scaffold_8753_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


1764..2477
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL1_SYNAS
ribosomal protein L1 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L1
RBG_16_NSX_64_22_RBG_16_scaffold_8753_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


2726..3241
DNA (516bp) protein (172aa)
50S ribosomal protein L10 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L10 id=1817335 bin=GWD2_Nitrospirae-related_57_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
50S ribosomal protein L10
RBG_16_NSX_64_22_RBG_16_scaffold_8753_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


3356..3733
DNA (378bp) protein (126aa)
rplL; 50S ribosomal protein L7/L12 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L7/L12 id=4542388 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rplL; 50S ribosomal protein L7/L12
RBG_16_NSX_64_22_RBG_16_scaffold_8753_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3873..7904
DNA (4032bp) protein (1344aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RBG_16_Nitrospirae_64_22_curated
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4542391 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_8753_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7923..12038
DNA (4116bp) protein (1372aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_16_Nitrospirae_64_22_curated
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=4542394 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_8753_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


12279..12650
DNA (372bp) protein (124aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RBG_16_Nitrospirae_64_22_curated
30S ribosomal protein S12 id=4542398 bin=GWC2_Nitrospirae_57_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rpsL; 30S ribosomal protein S12
RBG_16_NSX_64_22_RBG_16_scaffold_8753_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


12670..13140
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Desulfurispora thermophila RepID=UPI00036ED096
rpsG; 30S ribosomal protein S7 Tax=RBG_16_Nitrospirae_64_22_curated
rpsG; 30S ribosomal protein S7
RBG_16_NSX_64_22_RBG_16_scaffold_8753_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

13194..15287
DNA (2094bp) protein (698aa)
fusA; elongation factor G; K02355 elongation factor G Tax=RBG_16_Nitrospirae_64_22_curated
Elongation factor G id=4542500 bin=GWC2_Nitrospirae_57_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
fusA; elongation factor G
Displaying 14 items

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