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RBG_16_NSX_64_22_RBG_16_scaffold_32242

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_32242_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(2..130)
DNA (129bp) protein (43aa)
Uncharacterized protein Tax=RBG_16_Nitrospirae_64_22_curated
Uncharacterized protein id=1807176 bin=GWB2_Proteobacteria_55_19 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RBG_16_NSX_64_22_RBG_16_scaffold_32242_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(141..551)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IPB1_9PLAN
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(772..1191)
DNA (420bp) protein (140aa)
Putative DNA-binding protein n=2 Tax=Bordetella bronchiseptica RepID=K4TAN6_BORBO
DNA-binding protein; K13655 HTH-type transcriptional regulator / antitoxin for MqsR toxin Tax=RBG_16_Nitrospirae_64_22_curated
DNA-binding protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1194..1391)
DNA (198bp) protein (66aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1WE65_9LEPT
hypothetical protein; K13651 motility quorum-sensing regulator / GCU-specific mRNA interferase toxin Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2096..3760)
DNA (1665bp) protein (555aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=RBG_16_Nitrospirae_64_22_curated
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein id=1843071 bin=GWB2_Proteobacteria_55_19 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(3878..4732)
DNA (855bp) protein (285aa)
4Fe-4S ferredoxin Tax=RBG_16_Nitrospirae_64_22_curated
4Fe-4S ferredoxin, iron-sulfur binding domain protein id=2432462 bin=GWC2_Deltaproteobacteria_55_46 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
4Fe-4S ferredoxin
RBG_16_NSX_64_22_RBG_16_scaffold_32242_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4916..5758)
DNA (843bp) protein (281aa)
heterodisulfide reductase, cytochrome reductase subunit Tax=RBG_16_Nitrospirae_64_22_curated
Oxidoreductase FAD/NAD(P)-binding domain protein id=1843077 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hdrF; heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
RBG_16_NSX_64_22_RBG_16_scaffold_32242_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5863..6882)
DNA (1020bp) protein (340aa)
4Fe-4S ferredoxin Tax=RBG_16_Nitrospirae_64_22_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1843083 bin=GWB2_Proteobacteria_55_19 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
4Fe-4S ferredoxin
RBG_16_NSX_64_22_RBG_16_scaffold_32242_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6888..8372)
DNA (1485bp) protein (495aa)
4Fe-4S ferredoxin Tax=RBG_16_Nitrospirae_64_22_curated
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit D id=2432277 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
4Fe-4S ferredoxin
RBG_16_NSX_64_22_RBG_16_scaffold_32242_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8391..10370)
DNA (1980bp) protein (660aa)
hdrA-2; heterodisulfide reductase subunit A; K03388 heterodisulfide reductase subunit A [EC:1.8.98.1] Tax=RBG_16_Nitrospirae_64_22_curated
FAD dependent oxidoreductase id=1843157 bin=GWB2_Proteobacteria_55_19 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hdrA-2; heterodisulfide reductase subunit A
RBG_16_NSX_64_22_RBG_16_scaffold_32242_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10370..11275)
DNA (906bp) protein (302aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
CoB--CoM heterodisulfide reductase id=2432272 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11272..11679)
DNA (408bp) protein (136aa)
heterodisulfide reductase subunit C-like protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=15193785 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_NOV_55_46 organism_group=Proteobacteria
heterodisulfide reductase subunit C-like protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12068..12889
DNA (822bp) protein (274aa)
GntR family transcriptional regulator Tax=RBG_16_Nitrospirae_64_22_curated
Helix-turn-helix transcriptional regulator, GntR family id=1872459 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
GntR family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_32242_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12810..13214)
DNA (405bp) protein (135aa)
PAS sensor protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1L7_9BACT
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Nitrospirae_64_22_curated
response regulator receiver
RBG_16_NSX_64_22_RBG_16_scaffold_32242_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13216..13614)
DNA (399bp) protein (133aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Beggiatoa alba B18LD RepID=I3CFD3_9GAMM
response regulator receiver protein Tax=RBG_16_Nitrospirae_64_22_curated
Response regulator receiver protein
RBG_16_NSX_64_22_RBG_16_scaffold_32242_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13819..16086)
DNA (2268bp) protein (756aa)
GAF sensor hybrid histidine kinase Tax=RBG_16_Nitrospirae_64_22_curated
Multi-sensor hybrid histidine kinase id=3526650 bin=GWC2_Pelobacter_58_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
GAF sensor hybrid histidine kinase
RBG_16_NSX_64_22_RBG_16_scaffold_32242_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16083..16511)
DNA (429bp) protein (143aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_32242_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16537..17436)
DNA (900bp) protein (300aa)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] Tax=RBG_16_Nitrospirae_64_22_curate
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003719905
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor
RBG_16_NSX_64_22_RBG_16_scaffold_32242_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17885..19417)
DNA (1533bp) protein (511aa)
Putative enzyme (N-terminal) transcriptional regulator with P-loop containing NTP hydrolase domain (C-terminal)(YifB) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMN1_9BACT
transcriptional regulator Tax=RBG_16_Nitrospirae_64_22_curated
transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_32242_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(19501..20124)
DNA (624bp) protein (208aa)
NLP/P60 protein Tax=RBG_16_Nitrospirae_64_22_curated
NLP/P60 protein id=4683501 bin=GWC2_Nitrospirae_57_13 species=Sporosarcina newyorkensis genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Displaying 20 items

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