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RBG_16_NSX_64_22_RBG_16_scaffold_2605

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_2605_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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2..484
DNA (483bp) protein (161aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RBG_16_Nitrospirae_64_22_curated
Phosphatidylglycerophosphatase A id=4743690 bin=GWC2_Nitrospirae_57_13 species=Thiorhodospira sibirica genus=Thiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
phosphatidylglycerophosphatase A
RBG_16_NSX_64_22_RBG_16_scaffold_2605_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

491..1753
DNA (1263bp) protein (421aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=RBG_16_Nitrospirae_64_22_curated
CinA-like protein id=1251444 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
competence/damage-inducible protein CinA
RBG_16_NSX_64_22_RBG_16_scaffold_2605_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1800..2387
DNA (588bp) protein (196aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_16_Nitrospirae_64_22_curated
2 -5 RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=1242928 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
2'-5' RNA ligase
RBG_16_NSX_64_22_RBG_16_scaffold_2605_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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2448..3497
DNA (1050bp) protein (350aa)
recA; recombinase recA; K03553 recombination protein RecA Tax=RBG_16_Nitrospirae_64_22_curated
Protein RecA id=4743696 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
recA; recombinase recA
RBG_16_NSX_64_22_RBG_16_scaffold_2605_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3646..4815
DNA (1170bp) protein (390aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RBG_16_Nitrospirae_64_22_curated
Twitching motility protein id=4416154 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
twitching motility protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4812..5300
DNA (489bp) protein (163aa)
Regulatory protein RecX n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A8K6_ALKEH
recX; recombination regulator RecX; K03565 regulatory protein Tax=RBG_16_Nitrospirae_64_22_curated
recX; recombination regulator RecX
RBG_16_NSX_64_22_RBG_16_scaffold_2605_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


5297..7954
DNA (2658bp) protein (886aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Nitrospirae_64_22_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase id=4743702 bin=GWC2_Nitrospirae_57_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_2605_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8047..8355
DNA (309bp) protein (103aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=4743704 bin=GWC2_Nitrospirae_57_13 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8391..10118
DNA (1728bp) protein (576aa)
ABC transporter; K03688 ubiquinone biosynthesis protein Tax=RBG_16_Nitrospirae_64_22_curated
ABC-1 domain protein id=4743706 bin=GWC2_Nitrospirae_57_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ubiquinone biosynthesis protein UbiB
RBG_16_NSX_64_22_RBG_16_scaffold_2605_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10268..10525
DNA (258bp) protein (86aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_2605_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10522..10989
DNA (468bp) protein (156aa)
Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RBG_16_Nitrospirae_64_22_curated
Putative Holliday junction resolvase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B2V7_DESCC
Holliday junction resolvase
RBG_16_NSX_64_22_RBG_16_scaffold_2605_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10986..11996
DNA (1011bp) protein (337aa)
hypothetical protein; K07082 UPF0755 protein Tax=RBG_16_Nitrospirae_64_22_curated
Aminodeoxychorismate lyase id=4972276 bin=GWA2_OP3_52_12 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12037..12306
DNA (270bp) protein (90aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=2960759 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12318..12614
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FDCE
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12797..13828)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=5098355 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13825..14682)
DNA (858bp) protein (286aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Tax=RBG_16_Nitrospirae_64_22_curated
Ribosomal RNA small subunit methyltransferase I id=4349440 bin=GWC2_Nitrospirae_57_13 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_2605_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(14803..15123)
DNA (321bp) protein (107aa)
HNH endonuclease family protein n=2 Tax=Geobacter metallireducens RepID=Q39X67_GEOMG
HNH endonuclease Tax=RBG_16_Nitrospirae_64_22_curated
HNH endonuclease family protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15182..16303)
DNA (1122bp) protein (374aa)
hypothetical protein; K09121 hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein; K09121 hypothetical protein id=14428956 bin=bin3_NC10 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin3_NC10 organism_group=NC10
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16333..16650)
DNA (318bp) protein (106aa)
Nucleotidyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGZ1_THEYD
nucleotidyltransferase Tax=RBG_16_Nitrospirae_64_22_curated
nucleotidyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_2605_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16629..17009)
DNA (381bp) protein (127aa)
Hepn domain, putative n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGZ2_THEYD
hepn domain Tax=RBG_16_Nitrospirae_64_22_curated
hepn domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17167..17382)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JA23_NITOC
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17449..17781)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPH1_ROSS1
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17855..18616)
DNA (762bp) protein (254aa)
hypothetical protein; K06898 Tax=RBG_16_Nitrospirae_64_22_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase id=4952746 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18621..19634)
DNA (1014bp) protein (338aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Nitrospirae_64_22_curated
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=4583513 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_NSX_64_22_RBG_16_scaffold_2605_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(19645..20442)
DNA (798bp) protein (266aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_2605_26
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20667..21599)
DNA (933bp) protein (311aa)
chromate ion transporter Tax=RBG_16_Nitrospirae_64_22_curated
Chromate transporter, chromate ion transporter (CHR) family protein id=1938716 bin=GWD2_Nitrospirae-related_57_8 species=Psychromonas ingrahamii genus=Psychromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
chromate ion transporter
RBG_16_NSX_64_22_RBG_16_scaffold_2605_27
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(21853..22344)
DNA (492bp) protein (164aa)
Iron-sulfur cluster repair di-iron protein n=1 Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0U8J5_GEOTM
Hemerythrin HHE cation binding domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
hemerythrin HHE cation binding domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

22914..25802
DNA (2889bp) protein (963aa)
WD40 domain protein beta Propeller Tax=RBG_16_Nitrospirae_64_22_curated
WD-40 repeat-containing protein id=1887236 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
WD40 domain protein beta Propeller
RBG_16_NSX_64_22_RBG_16_scaffold_2605_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

26018..27241
DNA (1224bp) protein (408aa)
flavoprotein; K07007 Tax=RBG_16_Nitrospirae_64_22_curated
Flavoprotein, HI0933 family id=3012810 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
flavoprotein
RBG_16_NSX_64_22_RBG_16_scaffold_2605_30
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

27593..27844
DNA (252bp) protein (84aa)
prevent-host-death protein Tax=RBG_16_Nitrospirae_64_22_curated
Prevent-host-death family protein id=4314433 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
prevent-host-death protein
Displaying items 1-30 of 31 in total

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