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RBG_16_NSX_64_22_RBG_16_scaffold_7053

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_7053_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_7053_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(154..801)
DNA (648bp) protein (216aa)
LamG domain-containing protein jellyroll fold domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=UPI00024A986A id=1242309 bin=RBG2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG2 organism_group=Chloroflexi
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_7053_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(973..2082)
DNA (1110bp) protein (370aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_7053_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2226..2540)
DNA (315bp) protein (105aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_7053_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3039..5882
DNA (2844bp) protein (948aa)
phosphoenolpyruvate carboxylase Tax=RBG_16_Nitrospirae_64_22_curated
Phosphoenolpyruvate carboxylase id=4333621 bin=GWC2_Deltaproteobacteria_42_51 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
phosphoenolpyruvate carboxylase
RBG_16_NSX_64_22_RBG_16_scaffold_7053_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5983..6612)
DNA (630bp) protein (210aa)
Pentapeptide repeat protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QQI3_PERMH
pentapeptide repeat protein Tax=RBG_16_Nitrospirae_64_22_curated
pentapeptide repeat protein
RBG_16_NSX_64_22_RBG_16_scaffold_7053_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

6768..8360
DNA (1593bp) protein (531aa)
Adenylyl cyclase class-3/4/guanylyl cyclase n=2 Tax=Chloroflexus RepID=A9WJ80_CHLAA
adenylyl cyclase class-3/4/guanylyl cyclase Tax=RBG_16_Nitrospirae_64_22_curated
GAF sensor-containing adenylate/guanylate cyclase
RBG_16_NSX_64_22_RBG_16_scaffold_7053_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8644..9552)
DNA (909bp) protein (303aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_16_Nitrospirae_64_22_curated
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V8I1_SULSY
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
RBG_16_NSX_64_22_RBG_16_scaffold_7053_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9579..11327)
DNA (1749bp) protein (583aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_16_Nitrospirae_64_22_curated
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V8I2_SULSY
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_7053_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

11515..13587
DNA (2073bp) protein (691aa)
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit Tax=RBG_16_Nitrospirae_64_22_curated
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit id=3730898 bin=GWF2_Nitrospirae_44_13 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
formate hydrogenlyase membrane subunit HyfB
RBG_16_NSX_64_22_RBG_16_scaffold_7053_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

13744..14691
DNA (948bp) protein (316aa)
hydrogenase subunit (EC:1.12.7.2) Tax=RBG_16_Nitrospirae_64_22_curated
Hydrogenase subunit id=2213223 bin=GWB2_Proteobacteria_55_19 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
formate hydrogenlyase subunit 4
RBG_16_NSX_64_22_RBG_16_scaffold_7053_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

14692..15363
DNA (672bp) protein (224aa)
hyfE; hydrogenase 4 membrane component Tax=RBG_16_Nitrospirae_64_22_curated
Hydrogenase 4 membrane component id=3730894 bin=GWF2_Nitrospirae_44_13 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hyfE; hydrogenase 4 membrane component
RBG_16_NSX_64_22_RBG_16_scaffold_7053_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

15530..16981
DNA (1452bp) protein (484aa)
NADH/ubiquinone/plastoquinone (EC:1.-.-.-) Tax=RBG_16_Nitrospirae_64_22_curated
NADH/ubiquinone/plastoquinone (EC:1.-.-.-)
NADH/ubiquinone/plastoquinone (Complex I) id=2223072 bin=GWB2_Nitrospirae_rel_47_37 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RBG_16_NSX_64_22_RBG_16_scaffold_7053_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

16975..18633
DNA (1659bp) protein (553aa)
hyfG; subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenase Tax=RBG_16_Nitrospirae_64_22_curated
Hydrogenase subunit id=3465039 bin=GWC2_Nitrospirae_57_13 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hyfG; subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenase
RBG_16_NSX_64_22_RBG_16_scaffold_7053_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

18647..19159
DNA (513bp) protein (171aa)
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=RBG_16_Nitrospirae_64_22_curated
NADH ubiquinone oxidoreductase 20 kDa subunit id=4819342 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
NADH ubiquinone oxidoreductase 20 kDa subunit
RBG_16_NSX_64_22_RBG_16_scaffold_7053_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(19557..19778)
DNA (222bp) protein (74aa)
Transposase, IS204/IS1001/IS1096/IS1165 family protein n=3 Tax=mine drainage metagenome RepID=T0Z5V4_9ZZZZ
transposase of ISThsp14, ISL3 family Tax=RBG_16_Nitrospirae_64_22_curated
transposase of ISThsp14, ISL3 family
Displaying 16 items

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