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RBG_16_NSX_64_22_RBG_16_scaffold_3768

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_3768_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(1..93)
DNA (93bp) protein (31aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu 2 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=EFTU2_ROSS1
Elongation factor Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; R
RBG_16_NSX_64_22_RBG_16_scaffold_3768_trna_4
unknown

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comp(251..323)
DNA (73bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_3768_trna_3
unknown

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comp(437..510)
DNA (74bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_3768_trna_2
unknown

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comp(581..663)
DNA (83bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_3768_trna_1
unknown

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comp(753..825)
DNA (73bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_3768_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(1003..1788)
DNA (786bp) protein (262aa)
RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RBG_16_Nitrospirae_64_22_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0Z2_DESRM
RNA methyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_3768_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(1781..3307)
DNA (1527bp) protein (509aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Nitrospirae_64_22_curated
Cysteine--tRNA ligase id=4341673 bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cysS; cysteinyl-tRNA ligase
RBG_16_NSX_64_22_RBG_16_scaffold_3768_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(3316..3798)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RBG_16_Nitrospirae_64_22_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=ISPF_MOOTA
RBG_16_NSX_64_22_RBG_16_scaffold_3768_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(3836..4543)
DNA (708bp) protein (236aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RBG_16_Nitrospirae_64_22_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=4416591 bin=GWC2_Nitrospirae-rel_56_14 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_3768_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4626..5675)
DNA (1050bp) protein (350aa)
PilT protein-like Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=4433990 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
twitching motility protein PilT
RBG_16_NSX_64_22_RBG_16_scaffold_3768_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5792..7285)
DNA (1494bp) protein (498aa)
degQ; protease DegQ (EC:3.4.21.-) Tax=RBG_16_Nitrospirae_64_22_curated
degQ; protease DegQ (EC:3.4.21.-)
Protease DegQ id=4433992 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_3768_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7541..8908
DNA (1368bp) protein (456aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase; K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RBG_16_Nitrospirae_64_22_curated
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Desulfovibrio sp. A2 RepID=G2H5V3_9DELT
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
RBG_16_NSX_64_22_RBG_16_scaffold_3768_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8994..9830
DNA (837bp) protein (279aa)
UspA domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
Uncharacterized protein id=1871281 bin=GWB2_Proteobacteria_55_19 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3768_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

9842..10240
DNA (399bp) protein (133aa)
Conserved hypothetical cytosolic protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPG8_SYNFM
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3768_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10223..10993)
DNA (771bp) protein (257aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=RBG_16_Nitrospirae_64_22_curated
cobalamin synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] id=15193742 bin=GWC2_NOV_55_46 species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
cobalamin 5'-phosphate synthase
RBG_16_NSX_64_22_RBG_16_scaffold_3768_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10990..12054)
DNA (1065bp) protein (355aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=RBG_16_Nitrospirae_64_22_c
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=2 Tax=Geobacter sulfurreducens RepID=COBT_GEOSL
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_3768_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12109..12636)
DNA (528bp) protein (176aa)
hypothetical protein; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=RBG_16_Nitrospirae_64_22_curated
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RRF9_SPITD
hypothetical protein
Displaying 17 items

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