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RBG_16_NSX_64_22_RBG_16_scaffold_7592

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_7592_1
unknown

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3..71
DNA (69bp) protein (23aa)

This feature has no annotations

RBG_16_NSX_64_22_RBG_16_scaffold_7592_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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86..670
DNA (585bp) protein (195aa)
GTP-binding protein engB; K03978 GTP-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
Probable GTP-binding protein EngB id=4751733 bin=GWC2_Nitrospirae_57_13 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GTP-binding protein engB
RBG_16_NSX_64_22_RBG_16_scaffold_7592_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(732..2081)
DNA (1350bp) protein (450aa)
TrmA family RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RBG_16_Nitrospirae_64_22_curated
RNA methyltransferase, TrmA family n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKN2_GEOS8
TrmA family RNA methyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_7592_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(2078..2437)
DNA (360bp) protein (120aa)
response regulator receiver protein Tax=RBG_16_Nitrospirae_64_22_curated
Response regulator receiver protein id=1804280 bin=GWB2_Proteobacteria_55_19 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
response regulator receiver protein
RBG_16_NSX_64_22_RBG_16_scaffold_7592_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(2434..4842)
DNA (2409bp) protein (803aa)
GAF sensor signal transduction histidine kinase Tax=RBG_16_Nitrospirae_64_22_curated
GAF sensor signal transduction histidine kinase id=3692984 bin=GWC2_Nitrospirae_57_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GAF sensor signal transduction histidine kinase
RBG_16_NSX_64_22_RBG_16_scaffold_7592_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(4839..6326)
DNA (1488bp) protein (496aa)
glycogen/starch synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RBG_16_Nitrospirae_64_22_curated
Glycogen synthase id=4082210 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycogen/starch synthase
RBG_16_NSX_64_22_RBG_16_scaffold_7592_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6328..7326)
DNA (999bp) protein (333aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=RBG_16_Nitrospirae_64_22_curated
Galactose-1-phosphate uridylyltransferase id=3692990 bin=GWC2_Nitrospirae_57_13 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
galactose-1-phosphate uridylyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_7592_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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7477..7974
DNA (498bp) protein (166aa)
putative RNA-binding protein containing Zn ribbon Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=2033825 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
putative RNA-binding protein containing Zn ribbon
RBG_16_NSX_64_22_RBG_16_scaffold_7592_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8186..8593
DNA (408bp) protein (136aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3B5_THEOJ
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_Nitrospirae_64_22_curated
FeS cluster assembly scaffold protein NifU
RBG_16_NSX_64_22_RBG_16_scaffold_7592_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(8665..9180)
DNA (516bp) protein (172aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RBG_16_Nitrospirae_64_22_curated
putative hybrid sensor histidine kinase (EC:2.7.13.3)
multi-sensor hybrid histidine kinase id=3585891 bin=GWF2_Methylomirabilis_70_14 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 10 items

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