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RBG_16_NSX_64_22_RBG_16_scaffold_4532

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_4532_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

2..1042
DNA (1041bp) protein (347aa)
Multifunctional CCA protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DC48_9GAMM
czcB; cation efflux system protein Tax=RBG_16_Nitrospirae_64_22_curated
RND transporter
RBG_16_NSX_64_22_RBG_16_scaffold_4532_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1048..4185
DNA (3138bp) protein (1046aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHX2_9GAMM
acriflavin resistance protein Tax=RBG_16_Nitrospirae_64_22_curated
acriflavin resistance protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4188..4604
DNA (417bp) protein (139aa)
peptide chain release factor Tax=RBG_16_Nitrospirae_64_22_curated
Peptide chain release factor id=4196797 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
peptide chain release factor
RBG_16_NSX_64_22_RBG_16_scaffold_4532_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4837..5769
DNA (933bp) protein (311aa)
response regulator receiver modulated diguanylate cyclase Tax=RBG_16_Nitrospirae_64_22_curated
Response regulator receiver modulated diguanylate cyclase id=1796220 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
response regulator receiver modulated diguanylate cyclase
RBG_16_NSX_64_22_RBG_16_scaffold_4532_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5786..6157)
DNA (372bp) protein (124aa)
Nitrite reductase small subunit n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1G8_9RHIZ
nitrite reductase small subunit Tax=RBG_16_Nitrospirae_64_22_curated
nitrite reductase small subunit
RBG_16_NSX_64_22_RBG_16_scaffold_4532_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6237..8663)
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Anoxybacillus flavithermus NBRC 109594 RepID=R4G5I5_9BACI
NAD(P)H-dependent nitrite reductase, large subunit Tax=RBG_16_Nitrospirae_64_22_curated
NAD(P)H-dependent nitrite reductase, large subunit
RBG_16_NSX_64_22_RBG_16_scaffold_4532_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8681..9550)
DNA (870bp) protein (290aa)
Formate/nitrite transporter n=2 Tax=Paenibacillus RepID=F5LN23_9BACL
formate/nitrite transporter; K02598 nitrite transporter NirC Tax=RBG_16_Nitrospirae_64_22_curated
formate/nitrite transporter
RBG_16_NSX_64_22_RBG_16_scaffold_4532_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10045..10806
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE98_GEOUR
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10766..11161)
DNA (396bp) protein (132aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_4532_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11140..11406)
DNA (267bp) protein (89aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_4532_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11501..11905)
DNA (405bp) protein (135aa)
PilT protein domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
PilT protein-like id=4892448 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PilT protein domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11922..12149)
DNA (228bp) protein (76aa)
AbrB family transcriptional regulator Tax=RBG_16_Nitrospirae_64_22_curated
Transcriptional regulator, AbrB family id=4892449 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AbrB family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_4532_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12371..13357
DNA (987bp) protein (329aa)
Radical SAM n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARD3_RUBXD
radical SAM family protein Tax=RBG_16_Nitrospirae_64_22_curated
radical SAM family protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

13354..14082
DNA (729bp) protein (243aa)
putative DNA alkylation repair enzyme Tax=RBG_16_Nitrospirae_64_22_curated
putative DNA alkylation repair enzyme id=14632115 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
putative DNA alkylation repair enzyme
RBG_16_NSX_64_22_RBG_16_scaffold_4532_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(14203..14475)
DNA (273bp) protein (91aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_4532_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

14597..14806
DNA (210bp) protein (70aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=1715175 bin=GWB2_Geobacter-like_52_12 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

14793..15143
DNA (351bp) protein (117aa)
Growth inhibitor n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QVN8_NOSS7
growth inhibitor Tax=RBG_16_Nitrospirae_64_22_curated
growth inhibitor
RBG_16_NSX_64_22_RBG_16_scaffold_4532_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15629..15877)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKD7_9BACT
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15932..16195)
DNA (264bp) protein (88aa)
prevent-host-death protein Tax=RBG_16_Nitrospirae_64_22_curated
prevent-host-death protein
Prevent-host-death protein id=2207218 bin=GWA2_Planctomycete_KSU_39_15 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
RBG_16_NSX_64_22_RBG_16_scaffold_4532_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16385..16825)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=RBG_16_Nitrospirae_64_22_curated
Uncharacterized protein id=2101117 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RBG_16_NSX_64_22_RBG_16_scaffold_4532_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16873..19140)
DNA (2268bp) protein (756aa)
primosomal protein N' Tax=RBG_16_Nitrospirae_64_22_curated
Primosomal protein N' id=3322974 bin=GWC2_Nitrospirae_57_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
primosomal protein N'
RBG_16_NSX_64_22_RBG_16_scaffold_4532_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

19365..20279
DNA (915bp) protein (305aa)
oxidoreductase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_16_Nitrospirae_64_22_curated
NAD-dependent epimerase/dehydratase id=2099795 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
oxidoreductase
RBG_16_NSX_64_22_RBG_16_scaffold_4532_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

20345..22432
DNA (2088bp) protein (696aa)
PBS lyase Tax=RBG_16_Nitrospirae_64_22_curated
HEAT-like repeat-containing protein id=4952581 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
HEAT-like repeat-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

22425..23588
DNA (1164bp) protein (388aa)
metal dependent phosphohydrolase Tax=RBG_16_Nitrospirae_64_22_curated
HD domain-containing protein id=14622991 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cyclic diguanylate phosphodiesterase
RBG_16_NSX_64_22_RBG_16_scaffold_4532_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(23711..25330)
DNA (1620bp) protein (540aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_16_Nitrospirae_64_22_curated
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3C3_SPHTD
RBG_16_NSX_64_22_RBG_16_scaffold_4532_26
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

25446..26126
DNA (681bp) protein (227aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=14626345 bin=bin7_NC10_sister species=Herbaspirillum sp. CF444 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_27
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

26155..27858
DNA (1704bp) protein (568aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Glr3452 protein id=4555261 bin=GWC2_Methylomirabilis_70_16 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4532_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(28020..28493)
DNA (474bp) protein (158aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_4532_trna_1
unknown

Not on your lists

28083..28165
DNA (83bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_4532_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(28705..29577)
DNA (873bp) protein (291aa)
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying items 1-30 of 34 in total

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