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RBG_16_NSX_64_22_RBG_16_scaffold_5377

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_5377_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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373..582
DNA (210bp) protein (70aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=24551827 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Desulfovibrio gigas genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
RBG_16_NSX_64_22_RBG_16_scaffold_5377_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

557..1309
DNA (753bp) protein (251aa)
npdA; NAD-dependent deacetylase (EC:3.5.1.-); K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RBG_16_Nitrospirae_64_22_curated
npdA; NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacylase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B10C
RBG_16_NSX_64_22_RBG_16_scaffold_5377_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1323..2036
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Pseudomonas fragi RepID=UPI000287B79F
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_5377_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2050..2553)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=V7ZCF2_9XANT
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

2718..4547
DNA (1830bp) protein (610aa)
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] Tax=RBG_16_Nitrospirae_64_22_curated
ribonuclease E
Ribonuclease, Rne/Rng family id=4928303 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_NSX_64_22_RBG_16_scaffold_5377_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4746..5207)
DNA (462bp) protein (154aa)
Putative integral membrane protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3E0_9FIRM
copper resistance D Tax=RBG_16_Nitrospirae_64_22_curated
copper resistance D
RBG_16_NSX_64_22_RBG_16_scaffold_5377_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5204..5518)
DNA (315bp) protein (105aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DLV5_9BURK
putative periplasmic phospholipid-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
putative periplasmic phospholipid-binding protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5573..5917)
DNA (345bp) protein (115aa)
id=3811271 Tax=RBG_16_Nitrospirae_64_22_curated
id=3811271 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
RBG_16_NSX_64_22_RBG_16_scaffold_5377_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5914..6288)
DNA (375bp) protein (125aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_5377_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6446..7531)
DNA (1086bp) protein (362aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=2 Tax=Anaeromyxobacter RepID=B4UC28_ANASK
response regulator receiver modulated metal dependent phosphohydrolase Tax=RBG_16_Nitrospirae_64_22_curated
chemotaxis protein CheY
RBG_16_NSX_64_22_RBG_16_scaffold_5377_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(7654..8280)
DNA (627bp) protein (209aa)
response regulator receiver protein Tax=RBG_16_Nitrospirae_64_22_curated
Response regulator id=4574601 bin=GWC2_Deltaproteobacteria_55_46 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
response regulator receiver protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8523..9605)
DNA (1083bp) protein (361aa)
DegP2 peptidase. Serine peptidase. MEROPS family S01B n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ0_SYNFM
peptidase S1 and S6, chymotrypsin/Hap Tax=RBG_16_Nitrospirae_64_22_curated
peptidase S1 and S6, chymotrypsin/Hap
RBG_16_NSX_64_22_RBG_16_scaffold_5377_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9640..10227)
DNA (588bp) protein (196aa)
MglA protein; K06883 Tax=RBG_16_Nitrospirae_64_22_curated
MglA protein id=3315107 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
MglA protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10282..10776)
DNA (495bp) protein (165aa)
Roadblock/LC7 family protein Tax=RBG_16_Nitrospirae_64_22_curated
Roadblock/LC7 family protein id=4897650 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
dynein regulation protein LC7
RBG_16_NSX_64_22_RBG_16_scaffold_5377_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10854..11690)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8Z5_MAGSM
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11724..13376)
DNA (1653bp) protein (551aa)
Thiamine pyrophosphate enzyme domain protein TPP-binding protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8F7_MAGSM
thiamine pyrophosphate binding domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
thiamine pyrophosphate binding domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13391..15544)
DNA (2154bp) protein (718aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] Tax=RBG_16_Nitrospirae_64_22_curated
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8F6_MAGSM
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15894..16487)
DNA (594bp) protein (198aa)
recombinase RecR n=1 Tax=Streptomyces RepID=UPI00036E43D3
recombination protein RecR; K06187 recombination protein RecR Tax=RBG_16_Nitrospirae_64_22_curated
recombination protein RecR
RBG_16_NSX_64_22_RBG_16_scaffold_5377_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16521..16841)
DNA (321bp) protein (107aa)
hypothetical protein; K09747 hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Nucleoid-associated protein Dace_3096 id=2018535 bin=GWD2_Nitrospirae-related_57_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
nucleoid-associated protein
RBG_16_NSX_64_22_RBG_16_scaffold_5377_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16838..18613)
DNA (1776bp) protein (592aa)
DNA polymerase III subunits gamma/tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RBG_16_Nitrospirae_64_22_curated
DNA polymerase III, subunits gamma and tau id=3315079 bin=GWC2_Nitrospirae-rel_56_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
dnaX; DNA polymerase III subunits gamma and tau
RBG_16_NSX_64_22_RBG_16_scaffold_5377_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18877..19008)
DNA (132bp) protein (44aa)
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying 21 items

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