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RBG_16_NSX_64_22_RBG_16_scaffold_3209

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_3209_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3..86
DNA (84bp) protein (28aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(163..1365)
DNA (1203bp) protein (401aa)
Tiorf33 protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXD5_POLGS
Tiorf33 protein Tax=RBG_16_Nitrospirae_64_22_curated
Tiorf33 protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1454..2425)
DNA (972bp) protein (324aa)
BsuBI/PstI restriction endonuclease C-terminus (EC:3.1.21.4) Tax=RBG_16_Nitrospirae_64_22_curated
BsuBI/PstI restriction endonuclease C-terminus (EC:3.1.21.4)
BsuBI/PstI restriction endonuclease C-terminus n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL53_CHLTF
RBG_16_NSX_64_22_RBG_16_scaffold_3209_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2418..4103)
DNA (1686bp) protein (562aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL52_CHLTF
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4111..4527)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI000370E976
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4534..5316)
DNA (783bp) protein (261aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Spfh/band 7 domain protein id=1874125 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5327..6553)
DNA (1227bp) protein (409aa)
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class) Tax=RBG_16_Nitrospirae_64_22_curated
Membrane-bound serine protease id=3730823 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
membrane-bound serine protease
RBG_16_NSX_64_22_RBG_16_scaffold_3209_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6784..7458)
DNA (675bp) protein (225aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(7645..10395)
DNA (2751bp) protein (917aa)
outer membrane protein, OMP85 family; K07277 outer membrane protein Tax=RBG_16_Nitrospirae_64_22_curated
Outer membrane protein, OMP85 family, putative id=4798579 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
OMP85 family outer membrane protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10471..13941)
DNA (3471bp) protein (1157aa)
hypothetical protein; K09800 hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=4189473 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(14390..14545)
DNA (156bp) protein (52aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

14969..16957
DNA (1989bp) protein (663aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

17422..18219
DNA (798bp) protein (266aa)
mazG; nucleoside triphosphate pyrophosphohydrolase; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RBG_16_Nitrospirae_64_22_curated
MazG family protein id=4306453 bin=GWC2_Nitrospirae-rel_56_14 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
pyrophosphatase
RBG_16_NSX_64_22_RBG_16_scaffold_3209_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18216..19355)
DNA (1140bp) protein (380aa)
putative peptidase (EC:3.4.24.-) Tax=RBG_16_Nitrospirae_64_22_curated
putative peptidase (EC:3.4.24.-)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00037C2550
RBG_16_NSX_64_22_RBG_16_scaffold_3209_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(19348..20133)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUQ6_OPITP
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20295..21401)
DNA (1107bp) protein (369aa)
pyruvate formate-lyase activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_16_Nitrospirae_64_22_curated
pyruvate formate-lyase activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] id=14424754 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
RBG_16_NSX_64_22_RBG_16_scaffold_3209_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(21464..21661)
DNA (198bp) protein (66aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(21658..22197)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=14429186 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(22194..22433)
DNA (240bp) protein (80aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(22603..23862)
DNA (1260bp) protein (420aa)
Putative heme d1 biosynthesis radical SAM protein NirJ1 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL46_9FIRM
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_3209_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(24077..24775)
DNA (699bp) protein (233aa)
Putative heme protein n=1 Tax=planctomycete KSU-1 RepID=I3INE2_9PLAN
Putative heme protein Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(24855..26087)
DNA (1233bp) protein (411aa)
Probable cytochrome c1 protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1M8_9PROT
Probable cytochrome c1 protein Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(26485..27270)
DNA (786bp) protein (262aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_3209_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(27254..28528)
DNA (1275bp) protein (425aa)
radA; DNA recombination protein RadA; K04485 DNA repair protein RadA/Sms Tax=RBG_16_Nitrospirae_64_22_curated
DNA repair protein radA id=3703424 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
radA; DNA recombination protein RadA
RBG_16_NSX_64_22_RBG_16_scaffold_3209_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(28643..29305)
DNA (663bp) protein (221aa)
mrp; protein Mrp, putative ATPase (fragment); K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Nitrospirae_64_22_curated
mrp; protein Mrp, putative ATPase (fragment)
Putative uncharacterized protein id=3358800 bin=GWC2_Deltaproteobacteria_56_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Displaying 25 items

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