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RBG_16_NSX_64_22_RBG_16_scaffold_4383

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_4383_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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2..781
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N357_9CLOT
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4383_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

804..1811
DNA (1008bp) protein (336aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RBG_16_Nitrospirae_64_22_curated
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I id=4478462 bin=GWF2_Nitrospirae_44_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RBG_16_NSX_64_22_RBG_16_scaffold_4383_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1840..3033
DNA (1194bp) protein (398aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_16_Nitrospirae_64_22_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase id=3604827 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RBG_16_NSX_64_22_RBG_16_scaffold_4383_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3099..4010
DNA (912bp) protein (304aa)
permease; K07089 Tax=RBG_16_Nitrospirae_64_22_curated
Permease id=4985969 bin=GWA2_Elusimicrobia_56_46 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
permease
RBG_16_NSX_64_22_RBG_16_scaffold_4383_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4095..4391
DNA (297bp) protein (99aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=12493717 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4383_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4379..4723
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9Z8I4_LEPFM
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_4383_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5064..5750)
DNA (687bp) protein (229aa)
sensor protein Tax=RBG_16_Nitrospirae_64_22_curated
Response regulator receiver sensor signal transduction histidine kinase id=4815683 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
histidine kinase
RBG_16_NSX_64_22_RBG_16_scaffold_4383_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5808..6788)
DNA (981bp) protein (327aa)
Peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type n=2 Tax=Geobacter metallireducens RepID=Q39PS1_GEOMG
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Nitrospirae_64_22_curated
peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
RBG_16_NSX_64_22_RBG_16_scaffold_4383_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6902..10228)
DNA (3327bp) protein (1109aa)
mfd; transcription-repair coupling factor (EC:3.6.1.-); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_16_Nitrospirae_64_22_curated
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) id=14625927 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
mfd; transcription-repair coupling factor (EC:3.6.1.-)
RBG_16_NSX_64_22_RBG_16_scaffold_4383_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10225..10734)
DNA (510bp) protein (170aa)
rfaEb; d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-) Tax=RBG_16_Nitrospirae_64_22_curated
rfaEb; d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-)
Glycerol-3-phosphate cytidyltransferase id=4865804 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_4383_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10743..11705)
DNA (963bp) protein (321aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=4157140 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4383_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11708..12283)
DNA (576bp) protein (192aa)
gmhA; phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase) (EC:5.3.1.-) Tax=RBG_16_Nitrospirae_64_22_curated
gmhA; phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase) (EC:5.3.1.-)
Phosphoheptose isomerase id=4588770 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_NSX_64_22_RBG_16_scaffold_4383_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12404..12517
DNA (114bp) protein (38aa)
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying 13 items

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