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RBG_16_WS3_71_46_RBG_16_scaffold_3366

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_WS3_71_46_RBG_16_scaffold_3366_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3..794)
DNA (792bp) protein (264aa)
D-lactate dehydrogenase (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15] Tax=RBG_16_RIF_WS3X_71_46_curated
D-lactate dehydrogenase (EC:1.1.2.4)
FAD/FMN-containing dehydrogenases n=1 Tax=uncultured archaeon GZfos23H7 RepID=Q5XQA8_9ARCH id=5224781 bin=16ft_combo_ws3_JS1 species=uncultured archaeon GZfos23H7 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_16_WS3_71_46_RBG_16_scaffold_3366_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(954..1766)
DNA (813bp) protein (271aa)
Putative Rhomboid family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC85_9ZZZZ id=5224782 bin=16ft_combo_ws3_JS1 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rhomboid family protein Tax=RBG_16_RIF_WS3X_71_46_curated
protease
RBG_16_WS3_71_46_RBG_16_scaffold_3366_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2039..3244)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6V4G6_9PROT id=5224783 bin=16ft_combo_ws3_JS1 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
transporter, major facilitator family protein Tax=RBG_16_RIF_WS3X_71_46_curated
transporter, major facilitator family protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3305..4747)
DNA (1443bp) protein (481aa)
glycosyl transferase family protein id=24601096 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
glycosyl transferase family protein Tax=RBG_16_RIF_WS3X_71_46_curated
glycosyl transferase family protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4737..5789)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GUX4_9PROT id=5224785 bin=16ft_combo_ws3_JS1 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
heat domain containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
heat domain containing protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6280..7725
DNA (1446bp) protein (482aa)
Na+/proline symporter n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKE8_IGNAJ id=5224786 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Na+/proline symporter Tax=RBG_16_RIF_WS3X_71_46_curated
Na+/proline symporter
RBG_16_WS3_71_46_RBG_16_scaffold_3366_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7722..10202
DNA (2481bp) protein (827aa)
TonB-dependent receptor plug n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKF0_IGNAJ id=5224787 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein Tax=RBG_16_RIF_WS3X_71_46_curated
TonB-dependent receptor plug
RBG_16_WS3_71_46_RBG_16_scaffold_3366_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

10541..11197
DNA (657bp) protein (219aa)
glycine cleavage H-protein id=24479412 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
glycine cleavage H-protein Tax=RBG_16_RIF_WS3X_71_46_curated
glycine cleavage H-protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11266..12315
DNA (1050bp) protein (350aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=3 Tax=Anaeromyxobacter RepID=B4UAK3_ANASK id=5224789 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
4Fe-4S ferredoxin, iron-sulfur binding protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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12278..13576
DNA (1299bp) protein (433aa)
polysulfide reductase NrfD Tax=RBG_16_RIF_WS3X_71_46_curated
polysulfide reductase NrfD id=24479410 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

13580..14275
DNA (696bp) protein (232aa)
Glycine cleavage H-protein n=3 Tax=Anaeromyxobacter RepID=B4UAK5_ANASK id=5224791 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycine cleavage H-protein Tax=RBG_16_RIF_WS3X_71_46_curated
glycine cleavage H-protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14304..15038
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLQ7_9DELT id=5224792 bin=16ft_combo_ws3_JS1 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycine cleavage system H protein Tax=RBG_16_RIF_WS3X_71_46_curated
glycine cleavage system H protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

15085..16761
DNA (1677bp) protein (559aa)
periplasmic sensor signal transduction histidine kinase Tax=RBG_16_RIF_WS3X_71_46_curated
periplasmic sensor signal transduction histidine kinase id=24479407 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
sensor signal transduction histidine kinase
RBG_16_WS3_71_46_RBG_16_scaffold_3366_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

16787..18154
DNA (1368bp) protein (456aa)
Response regulator id=24479406 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Response regulator Tax=RBG_16_RIF_WS3X_71_46_curated
response regulator
RBG_16_WS3_71_46_RBG_16_scaffold_3366_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

18163..18717
DNA (555bp) protein (185aa)
peptidase, zinc-dependent id=24479405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase, zinc-dependent Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase, zinc-dependent
RBG_16_WS3_71_46_RBG_16_scaffold_3366_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18770..20812)
DNA (2043bp) protein (681aa)
peptidase M1 membrane alanine aminopeptidase Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase M1 membrane alanine aminopeptidase id=24479404 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M1 membrane alanine aminopeptidase
RBG_16_WS3_71_46_RBG_16_scaffold_3366_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(21027..22490)
DNA (1464bp) protein (488aa)
Malate dehydrogenase (EC:1.1.1.37) Tax=RBG_16_RIF_WS3X_71_46_curated
Malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUG6_ACCPU id=5224797 bin=16ft_combo_ws3_JS1 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_16_WS3_71_46_RBG_16_scaffold_3366_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22503..23588)
DNA (1086bp) protein (362aa)
A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RBG_16_RIF_WS3X_71_46_curated
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ53_SORC5 id=5224798 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_16_WS3_71_46_RBG_16_scaffold_3366_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23596..24435
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YV13_DACSA id=5224799 bin=16ft_combo_ws3_JS1 species=Dactylococcopsis salina genus=Dactylococcopsis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24432..24635)
DNA (204bp) protein (68aa)
alias=16ft_combo_ws3_scaffold_3366_20 id=24479399 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
alias=16ft_combo_ws3_scaffold_3366_20 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_16_WS3_71_46_RBG_16_scaffold_3366_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24658..25899)
DNA (1242bp) protein (414aa)
Redoxin domain-containing protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LNK3_BURGS id=5224801 bin=16ft_combo_ws3_JS1 species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
redoxin domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
ahpC/TSA family protein
RBG_16_WS3_71_46_RBG_16_scaffold_3366_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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25999..27003
DNA (1005bp) protein (335aa)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J171_FRASU
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RBG_16_RIF_WS3X_71_46_curated
molybdenum cofactor biosynthesis protein A
RBG_16_WS3_71_46_RBG_16_scaffold_3366_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(27119..27688)
DNA (570bp) protein (190aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158) id=24479396 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
UDP-N-acetylmuramate dehydrogenase (EC:1.3.1.98) Tax=RBG_16_RIF_WS3X_71_46_curated
UDP-N-acetylmuramate dehydrogenase (EC:1.3.1.98)
Displaying 23 items

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