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RBG_16_scaffold_204899_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_204899_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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628..987
DNA (360bp) protein (120aa)
Nucleotidyltransferase domain protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3KZX4_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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974..1453
DNA (480bp) protein (160aa)
Putative toxin-antitoxin system, antitoxin component n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L1G4_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1436..1855)
DNA (420bp) protein (140aa)
Putative nucleotidyltransferase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JR38_9FIRM
DNA polymerase beta domain-containing protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2029..2409)
DNA (381bp) protein (127aa)
id=2185072 bin=GWE2_Gammaproteobacteria_42_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3722..4258)
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=4847856 bin=GWC2_Nitrospirae-rel_56_14 species=Aliivibrio salmonicida genus=Aliivibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4568..4906)
DNA (339bp) protein (113aa)
mannose-sensitive agglutinin (MSHA) biogenesis protein MshD id=4847855 bin=GWC2_Nitrospirae-rel_56_14 species=Janthinobacterium lividum genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5020..5340)
DNA (321bp) protein (107aa)
General secretion pathway protein H id=4847854 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5547..6350)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YWM1_9BACT rbh
family 2 glycosyl transferase rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6464..6916)
DNA (453bp) protein (151aa)
Methylation n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T31_RHOFD
methylation
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6992..7444)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI000368350B
mannose-sensitive hemagglutinin a
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7584..7673)
DNA (90bp) protein (30aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4948436 bin=GWC2_Nitrospirae_57_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
AtoC; response regulator; K07714 two-component system, NtrC family, response regulator AtoC
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_204899_curated_12
unknown

Not on your lists

comp(7663..8451)
DNA (789bp) protein (263aa)

This feature has no annotations

Displaying 12 items

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