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RBG_16_scaffold_31317_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_31317_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1128
DNA (1128bp) protein (376aa)
lysA; diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase id=2429599 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_31317_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1204..2136
DNA (933bp) protein (311aa)
UbiA prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
1,4-dihydroxy-2-naphthoate octaprenyltransferase id=1708106 bin=GWB2_Proteobacteria_55_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_31317_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2110..2829)
DNA (720bp) protein (240aa)
Radical SAM domain protein id=4864835 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_31317_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2839..3084)
DNA (246bp) protein (82aa)
Radical SAM domain protein id=4864835 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_31317_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3719..5872)
DNA (2154bp) protein (718aa)
Histidine kinase (EC:2.7.13.3) rbh
Putative Histidine kinase id=3103439 bin=GWC2_Nitrospirae_57_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_31317_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5973..6962)
DNA (990bp) protein (330aa)
Putative uncharacterized protein id=4436546 bin=GWC2_Nitrospirae-rel_56_14 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 6 items

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