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RBG_16_scaffold_7129_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_7129_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1603..2451
DNA (849bp) protein (283aa)
Peptidase M48 Ste24p id=4790888 bin=GWC2_Nitrospirae-rel_56_14 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2480..2896
DNA (417bp) protein (139aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4175..4759
DNA (585bp) protein (195aa)
Uncharacterized protein id=2487437 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4716..5285
DNA (570bp) protein (190aa)
Fibronectin type III domain-containing protein id=2849748 bin=GWC2_Deltaproteobacteria_56_8 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5379..6305)
DNA (927bp) protein (309aa)
Glycosyl transferase family protein n=1 Tax=Alishewanella agri BL06 RepID=I9P5R6_9ALTE
family 2 glycosyl transferase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6942..8159)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein id=2213261 bin=GWB2_Proteobacteria_55_19 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8332..9483)
DNA (1152bp) protein (384aa)
Glycosyltransferase, YqgM-like family n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKH0_GEOSK rbh
glycosyltransferase, group 1 family protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9552..10301)
DNA (750bp) protein (250aa)
hypothetical protein id=5041853 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10346..11488)
DNA (1143bp) protein (381aa)
Polysaccharide deacetylase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7U9E2_9DELT
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11497..12507)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. EN3 RepID=U7HT15_9ALTE
polysaccharide deacetylase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12519..13406)
DNA (888bp) protein (296aa)
gt2I; glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, putative, gt2I n=1 Tax=Cellvibrio japonicus (strain Ueda107) PF93_CELJU">RepID=B3PF93_CELJU
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_12
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13408..14760)
DNA (1353bp) protein (451aa)
Adenylyltransferase, putative id=2849723 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria rbh
capK related-protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14859..15890)
DNA (1032bp) protein (344aa)
Fucose 4-O-acetylase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z208_LISDA
Fucose 4-O-acetylase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_14
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15976..16875)
DNA (900bp) protein (300aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_7129_curated_15
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16905..18227)
DNA (1323bp) protein (441aa)
Polysaccharide biosynthesis family protein id=2462147 bin=GWC2_Deltaproteobacteria_56_8 species=Cellvibrio japonicus genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria rbh
polysaccharide biosynthesis protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 15 items

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