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RBG_16_scaffold_10695_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_10695_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..615)
DNA (615bp) protein (205aa)
UvrABC system protein B id=4925457 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

956..1375
DNA (420bp) protein (140aa)
id=3930662 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1538..2989)
DNA (1452bp) protein (484aa)
Putative uncharacterized protein id=2948572 bin=GWC2_Deltaproteobacteria_42_51 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
TonB family C-terminal domain-containing protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2982..3476)
DNA (495bp) protein (165aa)
Biopolymer transport protein id=2948568 bin=GWC2_Deltaproteobacteria_42_51 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
adventurous gliding motility protein S
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3482..3724)
DNA (243bp) protein (81aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3942..4586)
DNA (645bp) protein (215aa)
Putative transport related membrane protein id=2948557 bin=GWC2_Deltaproteobacteria_42_51 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
adventurous gliding motility protein R
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4593..4955)
DNA (363bp) protein (121aa)
id=2948555 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4952..5914)
DNA (963bp) protein (321aa)
Tetratricopeptide repeat id=2948549 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
TPR repeat-containing protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5911..6687)
DNA (777bp) protein (259aa)
Tetratricopeptide repeat id=2948549 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
TPR repeat-containing protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10022..10207
DNA (186bp) protein (62aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10654..11190)
DNA (537bp) protein (179aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_12
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11615..12334
DNA (720bp) protein (240aa)
Protein TolQ id=1717080 bin=GWB2_Proteobacteria_55_19 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
TolQ-related biopolymer transport membrane proton channel; K03562 biopolymer transport protein TolQ
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12331..12753
DNA (423bp) protein (141aa)
Cell division and transport-associated protein TolR id=3338581 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_14
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13276..13578
DNA (303bp) protein (101aa)
Protein TolA id=3338583 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_15
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13575..14897
DNA (1323bp) protein (441aa)
Protein TolB id=3338585 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
WD40 domain-containing protein; K03641 TolB protein rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_16
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14918..15517
DNA (600bp) protein (200aa)
Peptidoglycan-associated lipoprotein id=3338589 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_17
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15958..16476
DNA (519bp) protein (173aa)
Tetratricopeptide TPR_2 repeat protein id=3338592 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_18
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16515..17480
DNA (966bp) protein (322aa)
Response receiver-modulated diguanylate cyclase id=3338595 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
response receiver-modulated diguanylate cyclase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_10695_curated_19
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17477..17758
DNA (282bp) protein (94aa)
OmpA/MotB domain protein id=3338598 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 19 items

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