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RBG_16_scaffold_10744_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_10744_curated_1
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(453..1175)
DNA (723bp) protein (241aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_2
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1371..1466)
DNA (96bp) protein (32aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_3
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1500..1697)
DNA (198bp) protein (66aa)
Uncharacterized protein id=4056610 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_4
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1801..2265)
DNA (465bp) protein (155aa)
Large-conductance mechanosensitive channel id=4806713 bin=GWC2_Syntrophobacterales_56_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_5
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2657..2821
DNA (165bp) protein (55aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_6
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3004..3225
DNA (222bp) protein (74aa)
Rubredoxin n=2 Tax=Desulfovibrio africanus RepID=F3Z0G7_DESAF
rubredoxin-type Fe(Cys)4 protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_7
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3213..3368
DNA (156bp) protein (52aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_8
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3462..3635
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2E3_DESAT
hypothetical protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_9
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3849..4352)
DNA (504bp) protein (168aa)
Redoxin domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGJ2_DESAR
Redoxin domain-containing protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_10
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4446..4541
DNA (96bp) protein (32aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_11
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4801..5535
DNA (735bp) protein (245aa)
Ion transport 2 domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIZ6_DESAR
Ion transport 2 domain-containing protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_12
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5897..6781)
DNA (885bp) protein (295aa)
HhH-GPD family protein; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
HhH-GPD family protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEM5_DESAR rbh
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_13
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7326..7973
DNA (648bp) protein (216aa)
Two-component response regulator id=2187709 bin=GWE2_RBX1_39_32 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two-component response regulator
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_14
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7978..8697
DNA (720bp) protein (240aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMZ1_SYNFM
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_15
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8694..9311
DNA (618bp) protein (206aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_16
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9711..10235
DNA (525bp) protein (175aa)
Outer membrane lipoprotein Slp n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFZ8_DESAR
outer membrane lipoprotein Slp; K07285 outer membrane lipoprotein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_17
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10545..10955
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCF7_DESAR
hypothetical protein; K09008 hypothetical protein
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_18
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11660..12742
DNA (1083bp) protein (361aa)
UPI0003CEBB18 related cluster n=1 Tax=unknown RepID=UPI0003CEBB18
capsule synthesis protein CapA
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_19
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12750..13535
DNA (786bp) protein (262aa)
Patatin n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJC2_SYNFM rbh
patatin; K07001 NTE family protein rbh
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_20
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14135..14296
DNA (162bp) protein (54aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_21
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14577..14708
DNA (132bp) protein (44aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_22
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15008
DNA (216bp) protein (72aa)
Tax=RBG_16_Desulfobacca_58_9_curated
RBG_16_scaffold_10744_curated_23
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15284..15484)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y0D5_9BACT
hypothetical protein
Tax=RBG_16_Desulfobacca_58_9_curated
Displaying 23 items

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