name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_1
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(553..2268)
----------------- DNA (1716bp) protein (572aa) |
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
RNA polymerase sigma factor id=4205745 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RNA polymerase sigma factor
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_2
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2590..2730)
----------------- DNA (141bp) protein (47aa) |
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_3
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2967..4325)
----------------- DNA (1359bp) protein (453aa) |
replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase id=4454753 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_4
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4359..4805)
----------------- DNA (447bp) protein (149aa) |
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
50S ribosomal protein L9 id=4454840 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
50S ribosomal protein L9
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_5
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5219..6016)
----------------- DNA (798bp) protein (266aa) |
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YR93_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
hypothetical protein
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_6
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6200..6472)
----------------- DNA (273bp) protein (91aa) |
30S ribosomal protein S18 id=4454841 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RBG_16_Deltaproteobacteria_58_17_curated
30S ribosomal protein S18
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_7
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6469..6945)
----------------- DNA (477bp) protein (159aa) |
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
30S ribosomal protein S6 id=4860353 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S6
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_trna_1
unknown
|
Not on your lists |
comp(7069..7142)
----------------- DNA (74bp) |
transferRNA
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_8
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7989..8345
----------------- DNA (357bp) protein (119aa) |
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase id=4454846 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_9
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8309..9427
----------------- DNA (1119bp) protein (373aa) |
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase id=4774381 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_10
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9683..11308)
----------------- DNA (1626bp) protein (542aa) |
Formate dehydrogenase, alpha subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH62_9FIRM
formate dehydrogenase, alpha subunit, archaeal-type Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
formate dehydrogenase, alpha subunit, archaeal-type
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_11
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11321..12415)
----------------- DNA (1095bp) protein (365aa) |
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5) Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit G n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LJ97_THEPS
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_12
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12620..13840)
----------------- DNA (1221bp) protein (407aa) |
NAD-reducing hydrogenase subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
NAD-reducing hydrogenase subunit n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5U2_ANATU
NAD-reducing hydrogenase subunit
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_13
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13876..14220)
----------------- DNA (345bp) protein (115aa) |
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_14
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14601..14984)
----------------- DNA (384bp) protein (128aa) |
NADH dehydrogenase (ubiquinone) 24 kDa subunit (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
NADH dehydrogenase (ubiquinone) 24 kDa subunit (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D2G1_HALOH
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_15
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15382..16269
----------------- DNA (888bp) protein (296aa) |
integrase/recombinase; K04763 integrase/recombinase XerD Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Integrase/recombinase id=4774369 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
integrase/recombinase
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_16
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16427..18334
----------------- DNA (1908bp) protein (636aa) |
hypothetical protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Tetratricopeptide repeat family protein id=4569248 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_17
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18641..19468
----------------- DNA (828bp) protein (276aa) |
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase id=3547904 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_18
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20071..20691
----------------- DNA (621bp) protein (207aa) |
hypothetical protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Hypothetical membrane protein id=3547900 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_19
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20705..21262
----------------- DNA (558bp) protein (186aa) |
organic solvent tolerance protein; K09774 lipopolysaccharide export system protein LptA Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Organic solvent tolerance protein id=4569239 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
organic solvent tolerance protein
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_20
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21290..21466
----------------- DNA (177bp) protein (59aa) |
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_21
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21490..22212
----------------- DNA (723bp) protein (241aa) |
ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XB09_9BACT
ABC transporter ATP-binding protein
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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_3989_22
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22242..22397
----------------- DNA (156bp) protein (52aa) |
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XP32_9BACT
RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
RNA polymerase sigma-54 factor
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