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RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_1
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

3..1259
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JH18_9BACT
DNA modification methylase BstVI Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
type II restriction/modification enzyme
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_2
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

1335..2651
DNA (1317bp) protein (439aa)
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Uncharacterized protein id=4765234 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_3
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

2638..2826
DNA (189bp) protein (63aa)
id=4765206 Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
id=4765206 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_4
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

3387..4139
DNA (753bp) protein (251aa)
radical SAM protein; K03716 spore photoproduct lyase [EC:4.1.99.14] Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Putative uncharacterized protein id=4038657 bin=GWF2_Planctomycete_41_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
radical SAM domain-containing protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_5
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(4184..4843)
DNA (660bp) protein (220aa)
endonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7] Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Endonuclease V; K05982 deoxyribonuclease V [EC:3.1.21.7] id=15193324 bin=GWC2_NOV_55_46 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
endonuclease V (EC:3.1.21.7)
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(4847..5638)
DNA (792bp) protein (264aa)
putative n-carbamoyl-D-amino acid hydrolase (EC:3.5.1.77) Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
putative n-carbamoyl-D-amino acid hydrolase (EC:3.5.1.77)
Putative N-carbamoyl-D-amino acid hydrolase id=4704891 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(5690..6250)
DNA (561bp) protein (187aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9V4_9FIRM
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
hypothetical protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_8
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(6344..6841)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMY3_ARCVS
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
hypothetical protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_9
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(6817..7350)
DNA (534bp) protein (178aa)
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Putative uncharacterized protein id=2270645 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_10
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(7343..7666)
DNA (324bp) protein (108aa)
divalent-cation tolerance protein CutA; K03926 periplasmic divalent cation tolerance protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Divalent-cation tolerance protein CutA id=3721275 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
divalent-cation tolerance protein CutA
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_11
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(7764..8537)
DNA (774bp) protein (258aa)
methylated-DNA-protein-cystein methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Methylated-DNA-protein-cysteine S-methyltransferase id=2726294 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
methylated-DNA-protein-cystein methyltransferase
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_12
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(8562..9551)
DNA (990bp) protein (330aa)
response regulator; K07814 putative two-component system response regulator Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Putative uncharacterized protein id=4721249 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
response regulator
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_13
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(9636..9857)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKL8_THEYD
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
hypothetical protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_14
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(10094..10579)
DNA (486bp) protein (162aa)
hypothetical protein n=2 Tax=Verrucomicrobium sp. 3C RepID=UPI00036E5258
transposase IS4 family protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
transposase IS4 family protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_15
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(10866..11381)
DNA (516bp) protein (172aa)
hypothetical protein n=2 Tax=Verrucomicrobium sp. 3C RepID=UPI00036E5258
transposase IS1182 family protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
transposase IS1182 family protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_16
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

11553..11708
DNA (156bp) protein (52aa)
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_17
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

11716..12393
DNA (678bp) protein (226aa)
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Putative uncharacterized protein id=4939960 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_18
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

12780..13946
DNA (1167bp) protein (389aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=4044352 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_rbg_19ft_combo_scaffold_2162_19
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

13928..14092
DNA (165bp) protein (55aa)
Cation efflux system protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Cation efflux system protein id=4799448 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Displaying 19 items

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