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RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..723
DNA (723bp) protein (241aa)
hypothetical protein; K07083 id=24548368 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein; K07083 Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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835..1410
DNA (576bp) protein (192aa)
alias=16ft_combo_ws3_scaffold_775_75 id=24548369 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=5225646 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1419..2630
DNA (1212bp) protein (404aa)
alias=16ft_combo_ws3_scaffold_775_75 id=24548370 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=5225646 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2735..3172)
DNA (438bp) protein (146aa)
ACT domain-containing protein id=24548371 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ACT domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
ACT domain-containing protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3350..4381)
DNA (1032bp) protein (344aa)
radical SAM protein id=24548372 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
radical SAM protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_6
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4946..6580
DNA (1635bp) protein (545aa)
treS; trehalose synthase (EC:5.4.99.16); K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] id=24548373 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
trehalose synthase; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] Tax=RBG_16_Deltaproteobacteria_71_12_curated
trehalose synthase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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6627..7898
DNA (1272bp) protein (424aa)
putative glycosyl transferase, family 2 (EC:2.4.-.-) Tax=RBG_13_Acidobacteria_68_16_curated
putative glycosyl transferase, family 2 (EC:2.4.-.-)
Putative Glycosyl transferase, family 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8P2_9BACT
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7902..8603
DNA (702bp) protein (234aa)
hypothetical protein id=24548376 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_9
unknown

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comp(8876..9295)
DNA (420bp) protein (140aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9441..10160
DNA (720bp) protein (240aa)
trehalose synthase-like protein; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] Tax=RBG_16_RIF_WS3X_71_46_curated
Trehalose synthase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ87_RUBXD id=5225496 bin=16ft_combo_ws3_JS1 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
trehalose synthase-like protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10312..11814)
DNA (1503bp) protein (501aa)
Uncharacterized protein id=24548379 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bifidobacterium bifidum CAG:234 genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein {ECO:0000313|EMBL:CDK01815.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_12
unknown

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comp(11838..12149)
DNA (312bp) protein (104aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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12706..14268
DNA (1563bp) protein (521aa)
glycosidase id=24548380 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative glycanase or glycogenase with amylase domain Tax=RBG_16_RIF_WS3X_71_46_curated
glycosidase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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14253..14396
DNA (144bp) protein (48aa)
pep1; putative glucanohydrolase (EC:3.2.1.-); K01238 [EC:3.2.1.-] id=24548382 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pep1; putative glucanohydrolase (EC:3.2.1.-)
putative glycanase or glycogenase with amylase domain Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_15
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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comp(14362..15021)
DNA (660bp) protein (220aa)
Putative Linear gramicidin synthase subunit C Tax=RBG_16_Chloroflexi_58_8_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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15128..16654
DNA (1527bp) protein (509aa)
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RBG_16_RIF_WS3X_71_46_curated
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ELW4_9CHLR id=5225493 bin=16ft_combo_ws3_JS1 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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16651..18522
DNA (1872bp) protein (624aa)
malto-oligosyltrehalose trehalohydrolase id=24548385 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
malto-oligosyltrehalose trehalohydrolase Tax=RBG_16_RIF_WS3X_71_46_curated
malto-oligosyltrehalose trehalohydrolase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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18519..20528
DNA (2010bp) protein (670aa)
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] id=24548386 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=RBG_16_RIF_WS3X_71_46_curated
maltooligosyl trehalose synthase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_14952_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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20489..21232
DNA (744bp) protein (248aa)
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=RBG_16_RIF_WS3X_71_46_curated
maltooligosyl trehalose synthase (EC:5.4.99.15)
Maltooligosyl trehalose synthase n=3 Tax=Anaeromyxobacter RepID=Q2IMN4_ANADE id=5225491 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Displaying 19 items

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