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RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_1
unknown

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comp(2..148)
DNA (147bp) protein (49aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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319..1056
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FPV9_9FIRM id=5223144 bin=16ft_combo_ws3_JS1 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
HD domain-containing protein; K09163 hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
HD domain-containing protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1067..2527
DNA (1461bp) protein (487aa)
hypothetical protein id=24598039 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2683..3546
DNA (864bp) protein (288aa)
Ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] id=24598040 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RBG_16_RIF_WS3X_71_46_curated
Ketol-acid reductoisomerase (EC:1.1.1.86)
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3677..3955
DNA (279bp) protein (93aa)
histone family protein DNA-binding protein; K05788 integration host factor subunit beta id=24598041 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
histone family protein DNA-binding protein; K05788 integration host factor subunit beta Tax=RBG_16_RIF_WS3X_71_46_curated
histone family protein DNA-binding protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4050..4430)
DNA (381bp) protein (127aa)
putative Zn-dependent protease; K06973 id=24598042 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase membrane zinc metallopeptidase; K06973 Tax=RBG_16_RIF_WS3X_71_46_curated
Predicted Zn-dependent protease
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5036..5737
DNA (702bp) protein (234aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=24598043 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
l-allo-threonine aldolase (EC:4.1.2.-); K01620 threonine aldolase [EC:4.1.2.5] Tax=RBG_16_RIF_WS3X_71_46_curated
L-threonine aldolase (EC:4.1.2.5)
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6054..6188
DNA (135bp) protein (45aa)
l-allo-threonine aldolase (EC:4.1.2.-); K01620 threonine aldolase [EC:4.1.2.5] Tax=RBG_16_RIF_WS3X_71_46_curated
L-allo-threonine aldolase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FCB4_STIAD id=5223149 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7123..7743
DNA (621bp) protein (207aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=24598045 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_RIF_WS3X_71_46_curated
CDP-alcohol phosphatidyltransferase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7757..8989
DNA (1233bp) protein (411aa)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=24598046 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_16_RIF_WS3X_71_46_curated
Myo-inositol-1-phosphate synthase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_57436_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9132..9392
DNA (261bp) protein (87aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=24598047 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RBG_16_RIF_WS3X_71_46_curated
thymidylate kinase
Displaying 11 items

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